Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G017300.1 | Wheat | cytosol | 93.71 | 93.71 |
| HORVU1Hr1G001680.1 | Barley | cytosol | 26.52 | 49.45 |
| TraesCS1A01G017600.1 | Wheat | cytosol | 48.92 | 45.69 |
| TraesCS7A01G072600.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 28.88 | 36.21 |
| TraesCS4A01G370900.1 | Wheat | cytosol | 28.68 | 36.05 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 33.4 | 35.56 |
| TraesCS2A01G426400.1 | Wheat | cytosol | 32.61 | 33.4 |
| TraesCS2A01G419300.1 | Wheat | cytosol | 31.43 | 33.33 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 32.42 | 33.2 |
| TraesCS7A01G527300.1 | Wheat | plasma membrane | 18.47 | 32.41 |
| TraesCS4A01G026800.1 | Wheat | cytosol | 30.65 | 31.39 |
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 31.63 | 31.32 |
| TraesCS7A01G527400.1 | Wheat | cytosol | 7.66 | 30.71 |
| Os11t0278300-00 | Rice | cytosol | 26.33 | 29.91 |
| TraesCS7A01G527500.1 | Wheat | cytosol | 25.34 | 29.12 |
| TraesCS3A01G497000.1 | Wheat | cytosol | 21.22 | 24.22 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G017500.1 | EnsemblPlantsGene:TraesCS1A01G017500 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1A:+:9203523..9205052
Molecular Weight (calculated)
57526.7 Da
IEP (calculated)
4.974
GRAVY (calculated)
-0.044
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEPSSWVV PCYSGWSMEE AAAWSSEDRI SFQTSLPSHS DSVQLQMVEY AAPATPTPTQ DNDCSDPTIQ VFKEVVQSFH TDYLDSMERK MHKIPPSLIC
101: VGKWYIQPVT VAIGPYHHGL HPGVLEAERV KHVAATQCIT DSGRPVQEMY DAVFAVSADA RSLYYPDELA RFRDDDFLPM MFLDGCFLVQ FMRCYGDDVD
201: GMDEALNRYF CANYVRIYTD IMMLENQIPW VVVKTILDFM PEPSLWEKFV TAMRAGMTNQ MYSKEVPPID LDPTYKPPHL LALIRFYIVG NNDDIKVDRP
301: TAPGGDKPMS LSISVAELAS VGITIVPETE MSGLVHMTLQ KERLVHRGLC GKKFGFLFGD LRVPPLFPTD ANATWLVNMA AFELCKTPDF EGDDVKDEDS
401: AVCSYLHLFA MLLDQEEHVH DLRKTKVIEG GGLTSKEMLD LFTGIGKNMR LGKCYLDIII EIEKFKQRRS IWLKLYLFFI KHWTKIMAVV TVVGAVIGIL
501: SSLQALKPS
101: VGKWYIQPVT VAIGPYHHGL HPGVLEAERV KHVAATQCIT DSGRPVQEMY DAVFAVSADA RSLYYPDELA RFRDDDFLPM MFLDGCFLVQ FMRCYGDDVD
201: GMDEALNRYF CANYVRIYTD IMMLENQIPW VVVKTILDFM PEPSLWEKFV TAMRAGMTNQ MYSKEVPPID LDPTYKPPHL LALIRFYIVG NNDDIKVDRP
301: TAPGGDKPMS LSISVAELAS VGITIVPETE MSGLVHMTLQ KERLVHRGLC GKKFGFLFGD LRVPPLFPTD ANATWLVNMA AFELCKTPDF EGDDVKDEDS
401: AVCSYLHLFA MLLDQEEHVH DLRKTKVIEG GGLTSKEMLD LFTGIGKNMR LGKCYLDIII EIEKFKQRRS IWLKLYLFFI KHWTKIMAVV TVVGAVIGIL
501: SSLQALKPS
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.