Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G091250.1 | Barley | nucleus | 50.91 | 49.71 |
| TraesCS4A01G370900.1 | Wheat | cytosol | 37.83 | 46.42 |
| TraesCS7A01G072600.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 37.63 | 46.06 |
| TraesCS7A01G527400.1 | Wheat | cytosol | 11.67 | 45.67 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 38.43 | 44.63 |
| Os11t0278300-00 | Rice | cytosol | 38.43 | 42.63 |
| TraesCS7A01G527300.1 | Wheat | plasma membrane | 24.55 | 42.07 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 37.63 | 39.12 |
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 40.44 | 39.11 |
| TraesCS7A01G527500.1 | Wheat | cytosol | 34.81 | 39.05 |
| TraesCS2A01G419300.1 | Wheat | cytosol | 33.6 | 34.79 |
| TraesCS2A01G426400.1 | Wheat | cytosol | 32.19 | 32.19 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 30.78 | 30.78 |
| TraesCS1A01G017500.1 | Wheat | cytosol | 31.39 | 30.65 |
| TraesCS1A01G017600.1 | Wheat | cytosol | 30.78 | 28.07 |
| TraesCS3A01G497000.1 | Wheat | cytosol | 23.94 | 26.68 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G026800.1 | EnsemblPlantsGene:TraesCS4A01G026800 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:18301884..18303814
Molecular Weight (calculated)
56227.8 Da
IEP (calculated)
6.830
GRAVY (calculated)
-0.003
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIQASQPSS ADPTDARGEP ASQPEKSKVE EELKKAATHR SRPSCYYYYY FNEGDPQNYS DDLEMEQGLL PVVMFPDKQV QVEEWKIEAQ QFETDFGEME
101: MKIHRFPAST RSLGRRYILP MAVSIGLYHH GSSSLHEMEK VKRVATHHFI SYSGRSFEEM YAAVFSVIGA ARSFYDTKDS KVDVGDAEFA DMMFIDGCFL
201: LQYMLMCTGL GKLPPSLLSC FKSNEACIIN DIMLLENQLP WMVVNILRTF RSVPVEEFIG KMGRTLQIRG DMHRRPVVMD ACYMPPHLLG ILLFYKAGGI
301: NNNVPLSVPD GFRSMSKSIS AIELAEIGIK LTAGKTTKFM DTGIKKTFLS AEIFLAPLLL DDIRSCWLVN MAAFEVCLGM AAGAHQSTAV VCSYLAVLAM
401: LMDREEDVHE LRSKRLVQGE LTNKETLDFF KMLVKCISGG PLYIQIMEEV EAYKLNRWMW IKVHQFVYKN FKAIVTVLSI TGVLVGIFKA ILSLKRH
101: MKIHRFPAST RSLGRRYILP MAVSIGLYHH GSSSLHEMEK VKRVATHHFI SYSGRSFEEM YAAVFSVIGA ARSFYDTKDS KVDVGDAEFA DMMFIDGCFL
201: LQYMLMCTGL GKLPPSLLSC FKSNEACIIN DIMLLENQLP WMVVNILRTF RSVPVEEFIG KMGRTLQIRG DMHRRPVVMD ACYMPPHLLG ILLFYKAGGI
301: NNNVPLSVPD GFRSMSKSIS AIELAEIGIK LTAGKTTKFM DTGIKKTFLS AEIFLAPLLL DDIRSCWLVN MAAFEVCLGM AAGAHQSTAV VCSYLAVLAM
401: LMDREEDVHE LRSKRLVQGE LTNKETLDFF KMLVKCISGG PLYIQIMEEV EAYKLNRWMW IKVHQFVYKN FKAIVTVLSI TGVLVGIFKA ILSLKRH
001: MVRILSFTPP PPPPPPPSFR SIPRPPPPPS FRSIPPRRHF FKKKSKSLPP PPPPLPPARP FGPILPWRYS VKRKRTNRPQ PSTIQKDMFT WYFLTLMMRQ
101: KLQKQNQKPE ETREEWVISI RDKMEQALRE DATTSWDKLC IYRVPQYLQE NNKKSYFPQT VSLGPFHHGN KHLLPMDRHK WRAVNMVMAR TKHDIEMYID
201: AMKELEDRAR ACYEGPIDLS SNKFSEMLVL DGCFVLELFR GADEGFSELG YDRNDPVFAM RGSMHSIQRD MVMLENQLPL FVLNRLLEIQ LGKRHQTGLV
301: SRLAVRFFDP LMPTDEPLTK TDDSLEQDKF FNPIADKDKG ELHCLDVFRR NLLRPCSNPE PRLSRMRWSW RTRVADKRQQ QLIHCVTELR EAGIKFRTRK
401: TDRFWDIRFK NGYLEIPKLL IHDGTKSLFS NLIAFEQCHI DSSNDITSYI IFMDNLIDSS EDVRYLHYCG IIEHWLGNDY EVADLFNRLC QEVAFDPQNS
501: YLSQLSNKVD RNYSRKWNVL KAILKHKYFN NPWAYFSFFA ALVLLVLTLF QSFFTAYPYF NPPS
101: KLQKQNQKPE ETREEWVISI RDKMEQALRE DATTSWDKLC IYRVPQYLQE NNKKSYFPQT VSLGPFHHGN KHLLPMDRHK WRAVNMVMAR TKHDIEMYID
201: AMKELEDRAR ACYEGPIDLS SNKFSEMLVL DGCFVLELFR GADEGFSELG YDRNDPVFAM RGSMHSIQRD MVMLENQLPL FVLNRLLEIQ LGKRHQTGLV
301: SRLAVRFFDP LMPTDEPLTK TDDSLEQDKF FNPIADKDKG ELHCLDVFRR NLLRPCSNPE PRLSRMRWSW RTRVADKRQQ QLIHCVTELR EAGIKFRTRK
401: TDRFWDIRFK NGYLEIPKLL IHDGTKSLFS NLIAFEQCHI DSSNDITSYI IFMDNLIDSS EDVRYLHYCG IIEHWLGNDY EVADLFNRLC QEVAFDPQNS
501: YLSQLSNKVD RNYSRKWNVL KAILKHKYFN NPWAYFSFFA ALVLLVLTLF QSFFTAYPYF NPPS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SN05]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.