Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G503500.1 | Wheat | cytosol | 64.8 | 67.52 |
| Os01t0564600-00 | Rice | cytosol | 41.48 | 46.6 |
| TraesCS7A01G527400.1 | Wheat | cytosol | 10.09 | 35.43 |
| TraesCS7A01G527300.1 | Wheat | plasma membrane | 20.85 | 32.07 |
| TraesCS7A01G072600.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 26.91 | 29.56 |
| TraesCS4A01G370900.1 | Wheat | cytosol | 26.68 | 29.38 |
| TraesCS7A01G527500.1 | Wheat | cytosol | 28.92 | 29.12 |
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 28.92 | 25.1 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 26.68 | 24.9 |
| TraesCS2A01G426400.1 | Wheat | cytosol | 27.13 | 24.35 |
| TraesCS4A01G026800.1 | Wheat | cytosol | 26.68 | 23.94 |
| TraesCS2A01G419300.1 | Wheat | cytosol | 25.11 | 23.33 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 25.34 | 22.74 |
| TraesCS1A01G017500.1 | Wheat | cytosol | 24.22 | 21.22 |
| TraesCS1A01G017600.1 | Wheat | cytosol | 22.65 | 18.53 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G497000.1 | EnsemblPlantsGene:TraesCS3A01G497000 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF27 | PFAM:PF03140 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:722504861..722506680
Molecular Weight (calculated)
50599.5 Da
IEP (calculated)
8.214
GRAVY (calculated)
-0.132
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSRNDTGLD SVLHSLQSTT DPHRKIDRSF ISGGKPIIQV VPAFLRSIKN VERLFSPDII AIGPYHRDEP RLQSMEEIKK MAANEFCCSS TAHQVRDFYL
101: NVQEVAEQAR EFYAHDVGMN DNDFTAMLFF DGCFLLQFMT MVALDRGPQK LWKMPQLSEN WMQRISRDIL LVENQIPWVV LEALMRLKHV LVDRYIADTI
201: SNFDVKGAKP QVDCEGADKY QPFHLLDLVR HRQIGPFRSR MVAVAHEAEA PRPILNISSA LELAEVGVHI TAGKTARLSD MAVGKKNPLF GNLWLPPVYL
301: SELTMSLLIN MAAFEMLQGG TSDADYGASS YMQIMAVLMN REDDVRELRA KHILYPVFSD QETLGFFKSV CPYLRKGGQY DRVLQRLSNY QQDRMVRITL
401: HKFVYNNLKY LLTSGSAFGL LIPILRAVLS LKDANRSAPG APPRAL
101: NVQEVAEQAR EFYAHDVGMN DNDFTAMLFF DGCFLLQFMT MVALDRGPQK LWKMPQLSEN WMQRISRDIL LVENQIPWVV LEALMRLKHV LVDRYIADTI
201: SNFDVKGAKP QVDCEGADKY QPFHLLDLVR HRQIGPFRSR MVAVAHEAEA PRPILNISSA LELAEVGVHI TAGKTARLSD MAVGKKNPLF GNLWLPPVYL
301: SELTMSLLIN MAAFEMLQGG TSDADYGASS YMQIMAVLMN REDDVRELRA KHILYPVFSD QETLGFFKSV CPYLRKGGQY DRVLQRLSNY QQDRMVRITL
401: HKFVYNNLKY LLTSGSAFGL LIPILRAVLS LKDANRSAPG APPRAL
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.