Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G503500.1 | Wheat | cytosol | 49.12 | 45.56 |
| TraesCS3A01G497000.1 | Wheat | cytosol | 46.6 | 41.48 |
| Os11t0278300-00 | Rice | cytosol | 34.51 | 30.58 |
| Os08t0121275-00 | Rice | cytosol, golgi, plastid | 9.07 | 28.8 |
| Os08t0120900-01 | Rice | cytosol | 29.72 | 25.93 |
| Os08t0121500-00 | Rice | cytosol | 17.63 | 25.55 |
Protein Annotations
| EnsemblPlants:Os01t0564600-00 | EnsemblPlantsGene:Os01g0564600 | EntrezGene:9268340 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF27 |
| PFAM:PF03140 | ProteinID:BAD45070.1 | ProteinID:BAD45168.1 | ProteinID:BAH91154.1 | ProteinID:BAS72743.1 | ProteinID:EAZ12363.1 |
| RefSeq:XP_015638256.1 | UniParc:UPI000043A19E | UniProt:Q656U9 | MapMan:35.1 | : | : |
Description
Protein of unknown function DUF247, plant family protein. (Os01t0564600-00)
Coordinates
chr1:-:21555564..21556757
Molecular Weight (calculated)
45703.9 Da
IEP (calculated)
9.509
GRAVY (calculated)
-0.130
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSSKVREV VADLEKISLF PEGGFKPLIH KIPALLRNME NAGSLFDPDV VAIGPCHHDN PDLQGMKNIK KMAAKEFCSK SEHKVSAFYL TVQKVSGQAS
101: KCYPTSIDLN DFTDMMFYDG CFLLQFIKST ADRRARSPWT DLIRRMGLWD SIARDVLLLE NQIPWVVLEA LMSLKHVSVD RFIAYIISWF DEQMVRPQVQ
201: LDKYRPSHLL DLVRHFQIGS RPTKVEPISE PRLAISAIKL AENGIHFEPS ETTRFGDITV VKKRFLFGKI SLPPLFLGRR TMCWLANMVA FERTKAGRCD
301: CGVGSYMHII AGLMNSEEDV RELRTKGILY PVFSDKQTLK FFKSITQHVP YGYDYMRIRT GIDDYHRQRK LAVTLHRFLY NNFRFFLMAG SVIGILW
101: KCYPTSIDLN DFTDMMFYDG CFLLQFIKST ADRRARSPWT DLIRRMGLWD SIARDVLLLE NQIPWVVLEA LMSLKHVSVD RFIAYIISWF DEQMVRPQVQ
201: LDKYRPSHLL DLVRHFQIGS RPTKVEPISE PRLAISAIKL AENGIHFEPS ETTRFGDITV VKKRFLFGKI SLPPLFLGRR TMCWLANMVA FERTKAGRCD
301: CGVGSYMHII AGLMNSEEDV RELRTKGILY PVFSDKQTLK FFKSITQHVP YGYDYMRIRT GIDDYHRQRK LAVTLHRFLY NNFRFFLMAG SVIGILW
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.