Subcellular Localization
min:
: max
Winner_takes_all: cytosol, golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0120900-01 | Rice | cytosol | 56.8 | 15.6 |
| Os11t0278300-00 | Rice | cytosol | 43.2 | 12.05 |
| KXG24291 | Sorghum | cytosol, nucleus, peroxisome | 48.8 | 11.96 |
| Os01t0564600-00 | Rice | cytosol | 28.8 | 9.07 |
| Os08t0121500-00 | Rice | cytosol | 7.2 | 3.28 |
Protein Annotations
| EnsemblPlants:Os08t0121275-00 | EnsemblPlantsGene:Os08g0121275 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF247_pln |
| PANTHER:PTHR31549 | PANTHER:PTHR31549:SF27 | PFAM:PF03140 | ProteinID:BAT03599.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000393AF63 | UniProt:A0A0P0XBJ1 | MapMan:35.2 | : | : | : |
Description
Hypothetical conserved gene. (Os08t0121275-00)
Coordinates
chr8:+:1155873..1156250
Molecular Weight (calculated)
14113.3 Da
IEP (calculated)
10.374
GRAVY (calculated)
0.209
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALEATSSG AAASYVYGDF VVSSYLSALA MLMDREEDVQ QLRGHRVVLS TFSNTQTLDL FKRIGQHLSL GSRYFVVLEQ IEAYRRNRPA RTMVYKFLYK
101: HIKAISVILS IVSVFVGIFK ALRGR
101: HIKAISVILS IVSVFVGIFK ALRGR
001: MAPKQLKKIE NPVVSSSEEE ESASSGESAT SGEESDSSAD SPVKESSKKP VVVSKPSGSK TTTKPESSTA AKRSFEKTDE MSKKKSKNSM GEEDVKKKDE
101: TLKKNLFVRL FTEEDEAILL QGFLDFATKK ENPSDHIDDF YESIKNSISF DVTKPQLVTK IGNLKKKFNG RVSKGLKKGK NEEVMVFSKA SDQNCFDLSR
201: KIWGSNGVLY SKSKNMRQVQ LGGSVKVDED DQEPQKHRFV ISTLSSGQEL VSYLKVENPN SLGVDDTKWS AKLDKIKDGK QKRKMEKNLK KIQAKEEELS
301: MMRSEFVAAV TNVLSKQDNA SYSCK
101: TLKKNLFVRL FTEEDEAILL QGFLDFATKK ENPSDHIDDF YESIKNSISF DVTKPQLVTK IGNLKKKFNG RVSKGLKKGK NEEVMVFSKA SDQNCFDLSR
201: KIWGSNGVLY SKSKNMRQVQ LGGSVKVDED DQEPQKHRFV ISTLSSGQEL VSYLKVENPN SLGVDDTKWS AKLDKIKDGK QKRKMEKNLK KIQAKEEELS
301: MMRSEFVAAV TNVLSKQDNA SYSCK
Arabidopsis Description
Probable transcription factor At4g01260 [Source:UniProtKB/Swiss-Prot;Acc:O04608]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.