Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G444300.1 | Wheat | cytosol | 46.72 | 29.98 |
| TraesCS7A01G527500.1 | Wheat | cytosol | 47.81 | 29.57 |
| Os08t0120900-01 | Rice | cytosol | 37.96 | 22.86 |
| Os11t0278300-00 | Rice | cytosol | 34.31 | 20.98 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 21.17 | 18.89 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 20.8 | 18.57 |
| Os01t0564600-00 | Rice | cytosol | 25.55 | 17.63 |
| TraesCS7A01G527300.1 | Wheat | plasma membrane | 16.42 | 15.52 |
| Os08t0121275-00 | Rice | cytosol, golgi, plastid | 3.28 | 7.2 |
| TraesCS7A01G527400.1 | Wheat | cytosol | 3.28 | 7.09 |
Protein Annotations
| EnsemblPlants:Os08t0121500-00 | EnsemblPlantsGene:Os08g0121500 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF33 | PFAM:PF03140 |
| ProteinID:BAT03604.1 | SEG:seg | UniParc:UPI0003938F83 | UniProt:A0A0P0XB46 | MapMan:35.2 | : |
Description
Protein of unknown function DUF247, plant domain containing protein. (Os08t0121500-00)
Coordinates
chr8:-:1182738..1187176
Molecular Weight (calculated)
31125.3 Da
IEP (calculated)
4.610
GRAVY (calculated)
-0.191
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: IDPTVEGTII PPIQERVTFE RLEADFCKNE RKIHRFPQGL RRWIGGEGDR YIVPTFVALG PYHHGEPHLQ KTEELKYATA HYLCMKWGRS VEEVYGKVLA
101: VAGEAHGCYD NDDDAVAQFS DDEFAEMMFL DGCFLLKYMV LDNDCSLLEN RMVLSTGPCI QRDIVLLENQ IPWLVLDALM SIISPIDVHM FLTAVISDPI
201: YVARERRLLI TDRDVIVKSS VPHLLGLARS HLIDGMPTDH LELGFSDDDD DDHDTRLSIS AADPKQERMV RSPT
101: VAGEAHGCYD NDDDAVAQFS DDEFAEMMFL DGCFLLKYMV LDNDCSLLEN RMVLSTGPCI QRDIVLLENQ IPWLVLDALM SIISPIDVHM FLTAVISDPI
201: YVARERRLLI TDRDVIVKSS VPHLLGLARS HLIDGMPTDH LELGFSDDDD DDHDTRLSIS AADPKQERMV RSPT
001: MVLFSDGRST STHKRYRRLS WFVPIHSFHE ITRRDLGQNL HNHVETYVEP SKIEVKEEKP RETREEWVIS IKDKMEKALS YDATNSWDKL CIYRVPFYLQ
101: ENDKKSYLPQ TVSIGPYHHG KVHLRPMERH KWRAVNMIMA RTKHNIEMYI DAMKELEEEA RACYQGPIDM KNSNEFTEML VLDGCFVLEL FKGTIQGFQK
201: IGYARNDPVF AKRGLMHSIQ RDMIMLENQL PLFVLDRLLG LQTGTPNQTG IVAEVAVRFF KTLMPTSEVL TKSERSLDSQ EKSDELGDNG GLHCLDVFHR
301: SLIQSSETTN QGTPYEDMSM VEKQQQLIHC VTELRGAGVN FMRKETGQLW DIEFKNGYLK IPKLLIHDGE LTGFFFSTFL LVPHKFLLSI IFKILQFDKE
401: YICYQNTVVS LVSCRYQVSF LKSYCFRAVP YTIKQQHNIL HNLHG
101: ENDKKSYLPQ TVSIGPYHHG KVHLRPMERH KWRAVNMIMA RTKHNIEMYI DAMKELEEEA RACYQGPIDM KNSNEFTEML VLDGCFVLEL FKGTIQGFQK
201: IGYARNDPVF AKRGLMHSIQ RDMIMLENQL PLFVLDRLLG LQTGTPNQTG IVAEVAVRFF KTLMPTSEVL TKSERSLDSQ EKSDELGDNG GLHCLDVFHR
301: SLIQSSETTN QGTPYEDMSM VEKQQQLIHC VTELRGAGVN FMRKETGQLW DIEFKNGYLK IPKLLIHDGE LTGFFFSTFL LVPHKFLLSI IFKILQFDKE
401: YICYQNTVVS LVSCRYQVSF LKSYCFRAVP YTIKQQHNIL HNLHG
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SN03]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.