Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- plasma membrane 2
- endoplasmic reticulum 3
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 94.46 | 94.46 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 56.68 | 40.75 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 38.44 | 26.11 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 42.35 | 25.24 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 37.13 | 23.08 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 38.11 | 22.59 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 29.64 | 22.58 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 36.81 | 22.33 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 43.65 | 22.22 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 38.76 | 21.6 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 35.83 | 21.57 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 35.5 | 21.46 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 35.5 | 21.37 |
| Os08t0121500-00 | Rice | cytosol | 18.89 | 21.17 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 34.85 | 20.82 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 28.99 | 20.79 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 33.88 | 20.68 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G214600.1 | EnsemblPlantsGene:TraesCS7B01G214600 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:-:393639613..393640536
Molecular Weight (calculated)
35129.2 Da
IEP (calculated)
8.192
GRAVY (calculated)
0.228
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFLDGCFLL QYMHGLVQYN DGSINAEFAL FANRAVLSTG PCMLRDIFML ENQLPWLVLE ALMTFTHVPV CQFVASMAFI FDAGSTITRL PEDEIRRYRP
101: PHLLGFLRYY LIGNMPPTYP NYEFVKHLAL ASSAIELAEI GVQLTASNKR WFDMSIRKGY LAGELSLTQL FLNDYTASWL VNMAALEACT STGWPSDGYT
201: ISSYISLLAM LMDKEEDVHE LRAKHLVRSF FSNQEMLDLF KGLACHLRLG ARYFDILKKI DDYKRGRPVR IVVHKFLYKY FKNIVAVLSI AGVLVGVFKT
301: ILSLKQY
101: PHLLGFLRYY LIGNMPPTYP NYEFVKHLAL ASSAIELAEI GVQLTASNKR WFDMSIRKGY LAGELSLTQL FLNDYTASWL VNMAALEACT STGWPSDGYT
201: ISSYISLLAM LMDKEEDVHE LRAKHLVRSF FSNQEMLDLF KGLACHLRLG ARYFDILKKI DDYKRGRPVR IVVHKFLYKY FKNIVAVLSI AGVLVGVFKT
301: ILSLKQY
001: MVLVNVHSDG QPIIINKDML TWYLLSLKLR QKFQTKNQHS EPVQDPNLHG LPEVTRPNQD QNVQNHKQSH SESGKEVVEE RPEETTGDSW VISIRDKLEQ
101: ADRDDDTTIW GKLCIYRVPH YLQENDKKSY FPQTVSLGPY HHGKKRLRPM ERHKWRALNK VLKRLKQRIE MYTNAMRELE EKARACYEGP ISLSRNEFTE
201: MLVLDGCFVL ELFRGTVEGF TEIGYARNDP VFAMRGLMHS IQRDMIMLEN QLPLFVLDRL LELQLGTQNQ TGIVAHVAVK FFDPLMPTGE ALTKPDQSKL
301: MNWLEKSLDT LGDKGELHCL DVFRRSLLQS SPTPNTRSLL KRLTRNTRVV DKRQQQLVHC VTELREAGVK FRKRKTDRFW DIEFKNGYLE IPKLLIHDGT
401: KSLFSNLIAF EQCHIESSNH ITSYIIFMDN LINSSEDVSY LHYCGIIEHW LGSDSEVADL FNRLCQEVVF DPKDSHLSRL SGDVNRYYNR KWNVLKATLT
501: HKYFNNPWAY FSFSAAVILL LLTLCQSFYA VYAYYKPNSK L
101: ADRDDDTTIW GKLCIYRVPH YLQENDKKSY FPQTVSLGPY HHGKKRLRPM ERHKWRALNK VLKRLKQRIE MYTNAMRELE EKARACYEGP ISLSRNEFTE
201: MLVLDGCFVL ELFRGTVEGF TEIGYARNDP VFAMRGLMHS IQRDMIMLEN QLPLFVLDRL LELQLGTQNQ TGIVAHVAVK FFDPLMPTGE ALTKPDQSKL
301: MNWLEKSLDT LGDKGELHCL DVFRRSLLQS SPTPNTRSLL KRLTRNTRVV DKRQQQLVHC VTELREAGVK FRKRKTDRFW DIEFKNGYLE IPKLLIHDGT
401: KSLFSNLIAF EQCHIESSNH ITSYIIFMDN LINSSEDVSY LHYCGIIEHW LGSDSEVADL FNRLCQEVVF DPKDSHLSRL SGDVNRYYNR KWNVLKATLT
501: HKYFNNPWAY FSFSAAVILL LLTLCQSFYA VYAYYKPNSK L
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9S7S4]
SUBAcon: [cytosol,nucleus,peroxisome]
SUBAcon: [cytosol,nucleus,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.