Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G062700.1 | Wheat | cytosol | 58.19 | 47.73 |
| Os11t0278300-00 | Rice | cytosol | 38.5 | 38.84 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 26.11 | 38.44 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 33.85 | 37.97 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 33.63 | 35.6 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 32.3 | 34.11 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 35.4 | 33.54 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 36.06 | 32.21 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 35.4 | 31.37 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 34.96 | 30.68 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 40.71 | 30.51 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 33.19 | 29.53 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 31.64 | 28.95 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 32.08 | 27.99 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 31.42 | 27.63 |
| HORVU1Hr1G091220.1 | Barley | cytosol | 32.52 | 27.43 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 30.31 | 27.24 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 30.31 | 26.86 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G062800.1 | EnsemblPlantsGene:TraesCS6B01G062800 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6B:-:41842954..41844312
Molecular Weight (calculated)
51062.9 Da
IEP (calculated)
5.447
GRAVY (calculated)
-0.099
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEMEDLSDN SISRSSHSQN GMTMEAVEYR EDVGMPEEIR ILVEEFEAES LEMRMKIHRL PASLADMGDQ FVIPMALAIG PYHHGLPRLQ GMEKVKRVAA
101: YTFTRDSGHS YEEMYGRVLA VADQARRLYA AAAVSGSPQE FADMMFHDAC FLLQYMKLCS LSEEEKEYET YLSPLERFFL SNKACIDNDI MLLENQLPWL
201: VIEALMTATE VDVDAFIGNM GNSMGVKSSS SNAFGYINMA PSDRPPHILG LLLLHKQGQL INQLPGQLAV SATVSAVELE GIGIKLEHSE TDKFTDMGVK
301: RGAFSYKMFM SPLNLDRTRA TWLTNMVAFE VCTALPGSKN TEDTYMCSYI AILAMLMHRE EDVHKLRSEG FIHGELSDKQ ILQFFNQLAQ QMTPGRRYFE
401: ILIDIEHCKF NRRLRIMVHK FVSNNAKAIA AVLSIIGVLV GIFKALYSLK QH
101: YTFTRDSGHS YEEMYGRVLA VADQARRLYA AAAVSGSPQE FADMMFHDAC FLLQYMKLCS LSEEEKEYET YLSPLERFFL SNKACIDNDI MLLENQLPWL
201: VIEALMTATE VDVDAFIGNM GNSMGVKSSS SNAFGYINMA PSDRPPHILG LLLLHKQGQL INQLPGQLAV SATVSAVELE GIGIKLEHSE TDKFTDMGVK
301: RGAFSYKMFM SPLNLDRTRA TWLTNMVAFE VCTALPGSKN TEDTYMCSYI AILAMLMHRE EDVHKLRSEG FIHGELSDKQ ILQFFNQLAQ QMTPGRRYFE
401: ILIDIEHCKF NRRLRIMVHK FVSNNAKAIA AVLSIIGVLV GIFKALYSLK QH
001: MAEKTEIFSS PSSPPPSFYM VDKTGKLSSP SLPSSPPPSY YMGEKTEKYS SPSSPPPSFY RKYIISYINE QVELDSRSEK RVLLLESAGK ESCCIFRVPK
101: SFAEMNPEAY KPKVVSIGPY HHGRKHLEMI QQHKLRFLHL FLRTASVDRD VLFNAVVDWE DEIRKSYSEG LEGSPHELVY MMILDGCFIL MLLLIVSRKI
201: ELYESEDPIL TIPWILPSIQ SDLLLLENQV PFFVLQTLFD KSEIGVPGDL NRMAFSFFNL SMDKPERYWV KHRNFNAKHL LDLIRMSFLP MDGYEDFQLT
301: KGKSRKKSSS GLTLLLSATR LSLQGIDFSL RSGADSMLDI RLKKNRLQIP VLRLDGFIIS ILLNCVAFEQ FYAKSTNHIT SYVVFMGCLL NGKEDATFLS
401: RRRIIENYFG SEKEVSKFFK TICKDVVFDI HASYLRNVFV EINENTSKWY SICRSFLLSP RNFVALRFRP IYRF
101: SFAEMNPEAY KPKVVSIGPY HHGRKHLEMI QQHKLRFLHL FLRTASVDRD VLFNAVVDWE DEIRKSYSEG LEGSPHELVY MMILDGCFIL MLLLIVSRKI
201: ELYESEDPIL TIPWILPSIQ SDLLLLENQV PFFVLQTLFD KSEIGVPGDL NRMAFSFFNL SMDKPERYWV KHRNFNAKHL LDLIRMSFLP MDGYEDFQLT
301: KGKSRKKSSS GLTLLLSATR LSLQGIDFSL RSGADSMLDI RLKKNRLQIP VLRLDGFIIS ILLNCVAFEQ FYAKSTNHIT SYVVFMGCLL NGKEDATFLS
401: RRRIIENYFG SEKEVSKFFK TICKDVVFDI HASYLRNVFV EINENTSKWY SICRSFLLSP RNFVALRFRP IYRF
Arabidopsis Description
AT3g47210/F13I12_260 [Source:UniProtKB/TrEMBL;Acc:Q9SD52]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.