Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G091220.1 | Barley | cytosol | 52.41 | 46.64 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 23.27 | 36.16 |
| Os11t0278300-00 | Rice | cytosol | 33.54 | 35.71 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 33.54 | 35.4 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 31.66 | 33.86 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 25.58 | 32.71 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 31.03 | 29.25 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 35.22 | 28.87 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 25.58 | 28.5 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 32.08 | 27.77 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 28.09 | 27.13 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 28.72 | 26.92 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 27.25 | 26.64 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 28.72 | 26.55 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 26.83 | 25.96 |
| TraesCS1D01G017300.1 | Wheat | cytosol | 26.83 | 25.15 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.17 | 23.22 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G424200.1 | EnsemblPlantsGene:TraesCS1D01G424200 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1D:-:478767426..478769220
Molecular Weight (calculated)
53175.8 Da
IEP (calculated)
7.215
GRAVY (calculated)
0.027
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQDQAAPAF GFEGDYNLRI SRIYKFPAGL RALGTRYIEP MLVAIGPYHR HLPHLQGMEQ VKRLATDHFV NQVEPTREEL YAAVLHVAGT ARLLYGYGII
101: PPAPAAGDAP AADQQVPPPA QEQHHQALPA GDAHQQAPAQ EQQQQAPPAA AQHGNNPPPP MGDIEFADML FHDACFLLQY IRVRMLNNTG PPSLAHLFYS
201: KRSVINNDIM LLENQLPWLV LSSLINLTGH VPVTRFIVRL ASVFHARRGL GVEQGFELGD YRPAHLLALL RFHMKGDMTR QVDMLVNTPN QISVSFNAIG
301: LEEIGIKLKV SDGNMFADMR INKRSLLPGR KLVLPPLLLG NVSVTCLVNM AALEVCTGIS FVDNNTVVCS YVGILAMLMH REDDVHQLRA MHLVQGELTD
401: RETLDLFTSL GKLLPSGERY VSILESIEEY KLGNWLWIAV YRFFHLYFTK IATFFAAISS IAGVFKAFEL IVVKKHQ
101: PPAPAAGDAP AADQQVPPPA QEQHHQALPA GDAHQQAPAQ EQQQQAPPAA AQHGNNPPPP MGDIEFADML FHDACFLLQY IRVRMLNNTG PPSLAHLFYS
201: KRSVINNDIM LLENQLPWLV LSSLINLTGH VPVTRFIVRL ASVFHARRGL GVEQGFELGD YRPAHLLALL RFHMKGDMTR QVDMLVNTPN QISVSFNAIG
301: LEEIGIKLKV SDGNMFADMR INKRSLLPGR KLVLPPLLLG NVSVTCLVNM AALEVCTGIS FVDNNTVVCS YVGILAMLMH REDDVHQLRA MHLVQGELTD
401: RETLDLFTSL GKLLPSGERY VSILESIEEY KLGNWLWIAV YRFFHLYFTK IATFFAAISS IAGVFKAFEL IVVKKHQ
001: MVAVFYKDML SWYLLTLKIR EKLETQNQES VLVNQDQNLP GLPEITRSDQ DQNIHNNQQT QSDPAIYVIK ESPKDSRDDW VISITDKLEQ AHRDDDTTLW
101: GKLCIYRVPY YLQENDNKSY FPQTVSLGPY HHGKKRLRSM DRHKWRAVNR VLKRTNQGIK MYIDAMRELE EKARACYEGP LSLSSNEFIE MLVLDGCFVL
201: ELFRGAVEGF TELGYARNDP VFAMRGSMHS IQRDMVMLEN QLPLFVLNRL LELQLGTRNQ TGLVAQLAIR FFDPLMPTDE PLTKSGQSKL ENSLARDKSF
301: DPFADMGELH CLDVFRRSLL RSSPKPEPRL TRKRWSRNTR VADKRRQQLI HCVTELKEAG IKFRRRKTDR FWDMQFKNGY LEIPRLLIHD GTKSLFLNLI
401: AFEQCHIDSS NDITSYIIFM DNLIDSHEDV SYLHYCGIIE HWLGSDSEVA DLFNRLCQEV VFDTEDSYLS RLSIEVNRYY DHKWNAWRAT LKHKYFNNPW
501: AIVSFCAAVI LLVLTFSQSF YAVYAYYKPP S
101: GKLCIYRVPY YLQENDNKSY FPQTVSLGPY HHGKKRLRSM DRHKWRAVNR VLKRTNQGIK MYIDAMRELE EKARACYEGP LSLSSNEFIE MLVLDGCFVL
201: ELFRGAVEGF TELGYARNDP VFAMRGSMHS IQRDMVMLEN QLPLFVLNRL LELQLGTRNQ TGLVAQLAIR FFDPLMPTDE PLTKSGQSKL ENSLARDKSF
301: DPFADMGELH CLDVFRRSLL RSSPKPEPRL TRKRWSRNTR VADKRRQQLI HCVTELKEAG IKFRRRKTDR FWDMQFKNGY LEIPRLLIHD GTKSLFLNLI
401: AFEQCHIDSS NDITSYIIFM DNLIDSHEDV SYLHYCGIIE HWLGSDSEVA DLFNRLCQEV VFDTEDSYLS RLSIEVNRYY DHKWNAWRAT LKHKYFNNPW
501: AIVSFCAAVI LLVLTFSQSF YAVYAYYKPP S
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SN06]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.