Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G017300.1 | Wheat | cytosol | 62.99 | 53.83 |
| HORVU1Hr1G001680.1 | Barley | cytosol | 31.26 | 49.82 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 54.94 | 48.48 |
| Os11t0278300-00 | Rice | cytosol | 28.51 | 27.68 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 31.26 | 26.88 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 31.03 | 26.16 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 17.7 | 25.08 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 28.05 | 25.0 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 29.2 | 24.95 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 28.05 | 24.7 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 29.66 | 22.16 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 21.84 | 21.3 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 23.22 | 21.17 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 20.69 | 21.03 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 17.47 | 20.38 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G015700.1 | EnsemblPlantsGene:TraesCS1D01G015700 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1D:-:7340756..7342063
Molecular Weight (calculated)
48691.7 Da
IEP (calculated)
5.546
GRAVY (calculated)
-0.016
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEPSSWVV PCYSGWSMEE AAAAWSSEDR ISFQTSLPSH SDSVQLQVVE YASPATPTHD TCSDADQVFE EAAQVFNDDY FLIMGKKMHR FPPSLVDVGD
101: RYRVPVTVAI GPYHHGQSGL MEAEQVKHAA ANQCIRDSSG SLQEMYTKVS SVSDVARKLY RHDDVATFGH REDFVPMMFL DACFLVQFML SYVDSYVVSM
201: DMALNRYFCA NFERISTDIM MLENQIPWVV VEAIFHFMHL APSPWPWEDF VAAMRSGLKN RIDPGVDQGI VVVPTYEPPH LLGLVRYYIV GNNDDIKVDR
301: PTAPSGDKPM SLSISVAELA DVGITLVPEK EKSGLVHMTL QKKRLVDTGL GGKKFGFLFG DLRVPPLFPG IGKNMRLGKC YIDIMIDIEN FKDRMSWGLT
401: SYLFLDKHWP KIVAVATIIA AVIGILSSLQ ALKPH
101: RYRVPVTVAI GPYHHGQSGL MEAEQVKHAA ANQCIRDSSG SLQEMYTKVS SVSDVARKLY RHDDVATFGH REDFVPMMFL DACFLVQFML SYVDSYVVSM
201: DMALNRYFCA NFERISTDIM MLENQIPWVV VEAIFHFMHL APSPWPWEDF VAAMRSGLKN RIDPGVDQGI VVVPTYEPPH LLGLVRYYIV GNNDDIKVDR
301: PTAPSGDKPM SLSISVAELA DVGITLVPEK EKSGLVHMTL QKKRLVDTGL GGKKFGFLFG DLRVPPLFPG IGKNMRLGKC YIDIMIDIEN FKDRMSWGLT
401: SYLFLDKHWP KIVAVATIIA AVIGILSSLQ ALKPH
001: MVDAAEQPPS TSEGESLLKI HIERMHKKLK EPPRLLSSAA GKPTCSIFRV PQSMIDCNGR CYEPRVVSIG PYHRGQTQLK MIEEHKWRYL NVLLTRTQNL
101: TLEDYMKSVK NVEEVARECY SETIHMDSEE FNEMMVLDGC FLLELFRKVN NLVPFEPNDP LVAMAWVLPF FYRDFLCLEN QIPFFVLETL FNLTRGDNEN
201: ETNASLQSLA FAFFNNMMHR TEEDLARFKE LRAKHLLDLL RSSFIPESEL HTPPATNPGK EKMPSHIIHS ISKLRRAGIK LRELKDAESF LVVRFRHGTI
301: EMPAITVDDF MSSFLENCVA YEQCHVACSM HFTTYATLLD CLTNTYKDVE YLCDQNIIEN YFGTDTELAK FVNSLGRDVA FDITQCYLKD LFEEVNEYYK
401: SSWHVEWATF KFTYFNSPWS FVSALAALVL LVLSVIQTIY TVFQAYQK
101: TLEDYMKSVK NVEEVARECY SETIHMDSEE FNEMMVLDGC FLLELFRKVN NLVPFEPNDP LVAMAWVLPF FYRDFLCLEN QIPFFVLETL FNLTRGDNEN
201: ETNASLQSLA FAFFNNMMHR TEEDLARFKE LRAKHLLDLL RSSFIPESEL HTPPATNPGK EKMPSHIIHS ISKLRRAGIK LRELKDAESF LVVRFRHGTI
301: EMPAITVDDF MSSFLENCVA YEQCHVACSM HFTTYATLLD CLTNTYKDVE YLCDQNIIEN YFGTDTELAK FVNSLGRDVA FDITQCYLKD LFEEVNEYYK
401: SSWHVEWATF KFTYFNSPWS FVSALAALVL LVLSVIQTIY TVFQAYQK
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SJR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.