Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G409900.1 | Wheat | cytosol | 89.34 | 90.75 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 55.04 | 56.13 |
| EES08977 | Sorghum | cytosol | 47.09 | 48.8 |
| Zm00001d017638_P001 | Maize | plasma membrane | 45.74 | 46.64 |
| Zm00001d048651_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 43.6 | 41.74 |
| Zm00001d052775_P001 | Maize | nucleus | 42.44 | 39.96 |
| Zm00001d024995_P001 | Maize | cytosol | 38.18 | 39.09 |
| OQU84013 | Sorghum | cytosol | 40.12 | 39.06 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 35.85 | 37.91 |
| OQU84018 | Sorghum | plasma membrane | 37.98 | 36.3 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 34.3 | 35.83 |
| OQU84015 | Sorghum | cytosol | 22.29 | 35.71 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 34.11 | 35.7 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 25.78 | 35.66 |
| TraesCS1D01G017300.1 | Wheat | cytosol | 35.08 | 35.56 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 35.08 | 35.56 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 20.74 | 34.85 |
| Os11t0278300-00 | Rice | cytosol | 29.84 | 34.38 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 35.85 | 31.79 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 26.16 | 31.03 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 26.74 | 30.94 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 26.55 | 28.72 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 23.45 | 28.27 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G391700.1 | EnsemblPlantsGene:TraesCS1D01G391700 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:462262692..462264618
Molecular Weight (calculated)
58616.6 Da
IEP (calculated)
6.789
GRAVY (calculated)
-0.287
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLTGRSME PAVWPPCDFH LADWSMEPAG AAWVADEFVW STEMLGTCFQ TYVPSSPSGG QLQQVQYAAA TQKSPCEEEA HPQNKMEMEI RDPMQVFEKT
101: AHEFEVDIDM FDRKMHRYPG LIRRLSDGNK NYTTPVTVAI GPYYHGKDHL KPAEKVKYVA AYHCIMESGH SVQEMYDAVV SVAGEARGLY DKDVMAGISD
201: NDFEPMMFYD ACFLVQFMLK LTGSNLNSYL SRYFKGNMND IFRDILLLEN QLPWRVVETV MWFRQVSLPK LVNSLKNGLQ DRKVRGRKPL DWEEKYKPPH
301: LLGLVRFYIV GRSKPKPNRQ PLPRLESVSI SVGAMELAES GIMLTANKTS DLVDMGIDTK GPFCAELSLA PLSLNDLRSV WLVNMAAFEL STTLEFQGRD
401: AEDEASAVCS YLLLLAMFVD KEEDVHQLRT QSVLQGGGGL TNKEALSFFT SLQDLPLGSR YVRTMREIEN YRNKQRRKRT RCHAFFHKNW RIMATVFSAV
501: AALITILSTL ASLKKQ
101: AHEFEVDIDM FDRKMHRYPG LIRRLSDGNK NYTTPVTVAI GPYYHGKDHL KPAEKVKYVA AYHCIMESGH SVQEMYDAVV SVAGEARGLY DKDVMAGISD
201: NDFEPMMFYD ACFLVQFMLK LTGSNLNSYL SRYFKGNMND IFRDILLLEN QLPWRVVETV MWFRQVSLPK LVNSLKNGLQ DRKVRGRKPL DWEEKYKPPH
301: LLGLVRFYIV GRSKPKPNRQ PLPRLESVSI SVGAMELAES GIMLTANKTS DLVDMGIDTK GPFCAELSLA PLSLNDLRSV WLVNMAAFEL STTLEFQGRD
401: AEDEASAVCS YLLLLAMFVD KEEDVHQLRT QSVLQGGGGL TNKEALSFFT SLQDLPLGSR YVRTMREIEN YRNKQRRKRT RCHAFFHKNW RIMATVFSAV
501: AALITILSTL ASLKKQ
001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
Arabidopsis Description
At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.