Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84015 | Sorghum | cytosol | 33.53 | 52.48 |
| Zm00001d017638_P001 | Maize | plasma membrane | 41.07 | 40.91 |
| Zm00001d052775_P001 | Maize | nucleus | 44.25 | 40.69 |
| HORVU1Hr1G084670.1 | Barley | cytosol | 39.48 | 39.25 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 38.89 | 38.58 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 39.09 | 38.18 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 37.9 | 37.75 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 37.7 | 37.55 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 35.12 | 37.03 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 35.32 | 34.9 |
| Os11t0278300-00 | Rice | cytosol | 30.75 | 34.6 |
| Zm00001d048651_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 36.11 | 33.77 |
| Zm00001d052387_P001 | Maize | cytosol, nucleus, plasma membrane | 27.58 | 27.74 |
| Zm00001d035592_P001 | Maize | cytosol | 26.19 | 26.67 |
| Zm00001d035591_P002 | Maize | cytosol | 22.22 | 26.17 |
Protein Annotations
| EnsemblPlants:Zm00001d024995_P001 | EnsemblPlants:Zm00001d024995_T001 | EnsemblPlantsGene:Zm00001d024995 | EntrezGene:103641479 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 | ProteinID:AQK42537.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004DEBCA4 | UniProt:A0A1D6J3C4 | MapMan:35.2 | : |
Description
Expressed protein; protein
Coordinates
chr10:-:98278337..98280161
Molecular Weight (calculated)
57191.9 Da
IEP (calculated)
6.066
GRAVY (calculated)
-0.243
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVAEFQLA NWTPVDYASI DIPGGACGLQ AYDYDVQLQH HLAEYYSAAS QHNSNIVAKA AKISSNDDSD DASTSRSEVR KVVDRFKADM EMMKEKMHRY
101: PACLGAVDKS YTVPRIVAIG PYHCGMEHLK KAEEVKQVAA WQCTGTGKLL KEMYEELIPV ADAAYDLYDK DAIQGVAEDD FRHMMFFDAC FLVQFMLSRA
201: GSSKIDKSLQ VYLRHNRYDI FHDIMLLENQ LPWMVVEAVM RFMPQPSTIP KSFVHRMRRC MMPYDHREPP EPKPFIWYED YNPPHLLGLL RYYIVGRRCE
301: CDIDDDEEEK PEPKNMSFSA SAMDLAEIGI TLKANKTMQL IDMHLNRPKA GAVFTELCLA PLSLDRDRAS YLVNMAAHEL CAVESFGGAK EEDSAVCSYV
401: LLLANLVYRE EEVQELRERG IIQRGGGLTN EEALCFFTNF QNLRMGPRYY RIMQDIAIYR ENSLIKTKIH GFLHNHKKAI AAVVTGIGAV GGIIGALLSI
501: KKSI
101: PACLGAVDKS YTVPRIVAIG PYHCGMEHLK KAEEVKQVAA WQCTGTGKLL KEMYEELIPV ADAAYDLYDK DAIQGVAEDD FRHMMFFDAC FLVQFMLSRA
201: GSSKIDKSLQ VYLRHNRYDI FHDIMLLENQ LPWMVVEAVM RFMPQPSTIP KSFVHRMRRC MMPYDHREPP EPKPFIWYED YNPPHLLGLL RYYIVGRRCE
301: CDIDDDEEEK PEPKNMSFSA SAMDLAEIGI TLKANKTMQL IDMHLNRPKA GAVFTELCLA PLSLDRDRAS YLVNMAAHEL CAVESFGGAK EEDSAVCSYV
401: LLLANLVYRE EEVQELRERG IIQRGGGLTN EEALCFFTNF QNLRMGPRYY RIMQDIAIYR ENSLIKTKIH GFLHNHKKAI AAVVTGIGAV GGIIGALLSI
501: KKSI
001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
Arabidopsis Description
At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.