Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G066650.2 | Barley | cytosol | 21.56 | 37.89 |
| Os11t0278300-00 | Rice | cytosol | 29.94 | 33.48 |
| Zm00001d017638_P001 | Maize | plasma membrane | 28.14 | 27.87 |
| Zm00001d024995_P001 | Maize | cytosol | 27.74 | 27.58 |
| Zm00001d035591_P002 | Maize | cytosol | 22.75 | 26.64 |
| Zm00001d035592_P001 | Maize | cytosol | 25.55 | 25.86 |
| Zm00001d052775_P001 | Maize | nucleus | 27.54 | 25.18 |
| Zm00001d048651_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 26.95 | 25.05 |
Protein Annotations
| EnsemblPlants:Zm00001d052387_P001 | EnsemblPlants:Zm00001d052387_T001 | EnsemblPlantsGene:Zm00001d052387 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 | ProteinID:AQK57108.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000844D76C | UniProt:A0A1D6QGU3 | MapMan:35.2 | : | : |
Description
Expressed protein; protein
Coordinates
chr4:-:188917463..188918968
Molecular Weight (calculated)
55084.0 Da
IEP (calculated)
7.379
GRAVY (calculated)
-0.235
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKEVRDAVY KFEADFEFSK METMIHRFPA GAGLGDGLRT RYPHMVAPRF VAIGPYHHGE KRLAKMEGVK SAAAYYVCLR AELAPEMARQ AVLAVADEAR
101: GKYYDYEHDD GSSDGGGGEE GGKACFAAMM FRDACFLLLY MDAYTRSYGD TEDDVVNKSM RRFLFANRES INSDIMLLEN QLPWLVVQAL LGAFPGDEVK
201: TDMRRAVGTF VAAMGNSFRI SEPCKLVRYE WDDERDPPAH LLALLRRHKT EKPPEAGDDG THGNGNGNHN AETMRHPLIT PPPPAATAAA GRRKDDDGDE
301: ENPRPRPQAA AKAPVSVSAT SPADLEQIGI KLTPSWTASF SDMGLEKGRL FVSRLTLAPL SLSDARAACL VNMAALEVCC ASRFGDRAGA AAVCSYLALL
401: AFLMAGPEDV RRLRALGLLH GPRGDGDTLA FFSAAAEHLP SYGKRFALLM AEVQEYKRTR RVRTALYRWV HNHLATVVKV VSIIAMLVGL YQGLIFLTRN
501: S
101: GKYYDYEHDD GSSDGGGGEE GGKACFAAMM FRDACFLLLY MDAYTRSYGD TEDDVVNKSM RRFLFANRES INSDIMLLEN QLPWLVVQAL LGAFPGDEVK
201: TDMRRAVGTF VAAMGNSFRI SEPCKLVRYE WDDERDPPAH LLALLRRHKT EKPPEAGDDG THGNGNGNHN AETMRHPLIT PPPPAATAAA GRRKDDDGDE
301: ENPRPRPQAA AKAPVSVSAT SPADLEQIGI KLTPSWTASF SDMGLEKGRL FVSRLTLAPL SLSDARAACL VNMAALEVCC ASRFGDRAGA AAVCSYLALL
401: AFLMAGPEDV RRLRALGLLH GPRGDGDTLA FFSAAAEHLP SYGKRFALLM AEVQEYKRTR RVRTALYRWV HNHLATVVKV VSIIAMLVGL YQGLIFLTRN
501: S
001: METFGTIPPP PPLPPRLELR RQRAPPPQPP PPPPPPPPPP PPRLGPRLRL RLLPPPRQQL LRLRKQQPLV LPEPLPLRPR AIPWLTGHDV KKGKSYDKLR
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SNE9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.