Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035592_P001 | Maize | cytosol | 70.09 | 60.61 |
| Zm00001d052387_P001 | Maize | cytosol, nucleus, plasma membrane | 26.64 | 22.75 |
| Zm00001d024995_P001 | Maize | cytosol | 26.17 | 22.22 |
| Zm00001d048651_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 25.93 | 20.59 |
| Zm00001d052775_P001 | Maize | nucleus | 25.47 | 19.89 |
| Zm00001d017638_P001 | Maize | plasma membrane | 23.13 | 19.57 |
Protein Annotations
| EnsemblPlants:Zm00001d035591_P002 | EnsemblPlants:Zm00001d035591_T002 | EnsemblPlantsGene:Zm00001d035591 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF27 |
| PFAM:PF03140 | ProteinID:AQK79327.1 | SEG:seg | UniParc:UPI000843F1C2 | UniProt:A0A1D6LHI0 | MapMan:35.2 |
Description
Expressed protein; protein
Coordinates
chr6:-:35491511..35493263
Molecular Weight (calculated)
46734.1 Da
IEP (calculated)
6.444
GRAVY (calculated)
-0.103
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGNLVDGVE NESQQDAQVA EHAAGGTASI RHHEVGEAPP LRRYRRHPRP MEAKVAAVAE FCRAAGQPFA AVRGKMLSVA GAARGSYAAD GTLVHMNDGE
101: FAEMMLLDGC FLLQFMASVC RHRDDDPLIS RGEVRRSINA IVRDVMLLEN QIPWLVLSSL MQLMPPPAEP VVDSFLVLMA SAFHIVGDTN DASSQTRLLA
201: TGELDQSAPP HLLGLFHRRH MDMGAVRTQQ HQSGILRVPV QLASLSSTAV ELAEMGVKLA PSKTKTFGDM AMSKRHWPLG LFGELSLAPL VLNRLTECWL
301: LNMAAYESCQ PQQQGDATDS FPVSSYVTLV SLLVNRPEDV QEMRAKGLVV SVFDDGETLA FFKALAPHLS VGCRYYEVFQ FLQEYRQERW LSGCGSPSTG
401: SCTTTSRPSP LSSPSSACSR DSSRPSFL
101: FAEMMLLDGC FLLQFMASVC RHRDDDPLIS RGEVRRSINA IVRDVMLLEN QIPWLVLSSL MQLMPPPAEP VVDSFLVLMA SAFHIVGDTN DASSQTRLLA
201: TGELDQSAPP HLLGLFHRRH MDMGAVRTQQ HQSGILRVPV QLASLSSTAV ELAEMGVKLA PSKTKTFGDM AMSKRHWPLG LFGELSLAPL VLNRLTECWL
301: LNMAAYESCQ PQQQGDATDS FPVSSYVTLV SLLVNRPEDV QEMRAKGLVV SVFDDGETLA FFKALAPHLS VGCRYYEVFQ FLQEYRQERW LSGCGSPSTG
401: SCTTTSRPSP LSSPSSACSR DSSRPSFL
001: METFGTIPPP PPLPPRLELR RQRAPPPQPP PPPPPPPPPP PPRLGPRLRL RLLPPPRQQL LRLRKQQPLV LPEPLPLRPR AIPWLTGHDV KKGKSYDKLR
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SNE9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.