Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES08977 | Sorghum | cytosol | 63.45 | 68.67 |
| HORVU1Hr1G084670.1 | Barley | cytosol | 49.17 | 52.27 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 46.57 | 49.6 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 46.38 | 49.41 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 42.3 | 47.7 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 44.9 | 47.45 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 42.12 | 44.69 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 41.74 | 43.6 |
| Zm00001d017638_P001 | Maize | plasma membrane | 40.45 | 43.08 |
| Zm00001d052775_P001 | Maize | nucleus | 37.11 | 36.5 |
| Zm00001d024995_P001 | Maize | cytosol | 33.77 | 36.11 |
| Os11t0278300-00 | Rice | cytosol | 28.2 | 33.93 |
| Zm00001d052387_P001 | Maize | cytosol, nucleus, plasma membrane | 25.05 | 26.95 |
| Zm00001d035592_P001 | Maize | cytosol | 24.3 | 26.46 |
| Zm00001d035591_P002 | Maize | cytosol | 20.59 | 25.93 |
Protein Annotations
| EnsemblPlants:Zm00001d048651_P001 | EnsemblPlants:Zm00001d048651_T001 | EnsemblPlantsGene:Zm00001d048651 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 | ProteinID:AQK48331.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002219C12 | UniProt:K7UNT6 | MapMan:35.2 | : | : |
Description
Expressed protein; protein
Coordinates
chr4:-:2627597..2629906
Molecular Weight (calculated)
59912.0 Da
IEP (calculated)
7.172
GRAVY (calculated)
-0.118
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDPPMQGCS SFTALPNWNV EYAGWAPAGY PLDLQESSSE STDETFGSSW LELQTSSSSG GAQMVEYAGA AAAADTGSHR RTTTKIPAVV NPIHVFEDAA
101: REFKVDIDTM KMKIHMYPPS IQVFDDESFT VPRLVAIGPY HHGRTQLRQA EKAKHVAAYH CVTESGHSVQ DLYDAVALAA SDARGRGLYD RDALARTSRH
201: DFLAMMFYDA CFLVQYFACR TAVDGSAAGA MDMDPSLRSF FDLNRKAIRH DIVLLENQIP WPVVEAVMRF RPVDLDAFVA FWKQYLQDRK VLGDKTKHQP
301: AAHAVDGGGG GFESQFQPPH LLGLLRFHIV GRGNTTRPPT QARSTSNTIS FSVGAVELAE IGINLRADMG TTELIHMGVR KRGVFAELSM APLSLDDERA
401: SFLINMAALE LCATSNFQEA EPEDSAVCSY LLLLSLLVHR EEDVQELRTK HLLQGGAGLI NKDALHFFTR LQSLPLRGSS CYVRIMMEID KYKVKRRMQI
501: KVHAFFYKNK RTIFTIFSVL GVLVSILGTL MSLKKRSML
101: REFKVDIDTM KMKIHMYPPS IQVFDDESFT VPRLVAIGPY HHGRTQLRQA EKAKHVAAYH CVTESGHSVQ DLYDAVALAA SDARGRGLYD RDALARTSRH
201: DFLAMMFYDA CFLVQYFACR TAVDGSAAGA MDMDPSLRSF FDLNRKAIRH DIVLLENQIP WPVVEAVMRF RPVDLDAFVA FWKQYLQDRK VLGDKTKHQP
301: AAHAVDGGGG GFESQFQPPH LLGLLRFHIV GRGNTTRPPT QARSTSNTIS FSVGAVELAE IGINLRADMG TTELIHMGVR KRGVFAELSM APLSLDDERA
401: SFLINMAALE LCATSNFQEA EPEDSAVCSY LLLLSLLVHR EEDVQELRTK HLLQGGAGLI NKDALHFFTR LQSLPLRGSS CYVRIMMEID KYKVKRRMQI
501: KVHAFFYKNK RTIFTIFSVL GVLVSILGTL MSLKKRSML
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.