Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G084670.1 | Barley | cytosol | 46.44 | 46.35 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 46.64 | 45.74 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 45.26 | 45.08 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 44.66 | 44.66 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 44.47 | 44.47 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 41.5 | 43.93 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 43.28 | 42.94 |
| Zm00001d024995_P001 | Maize | cytosol | 40.91 | 41.07 |
| Zm00001d048651_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 43.08 | 40.45 |
| Zm00001d052775_P001 | Maize | nucleus | 42.29 | 39.05 |
| Os11t0278300-00 | Rice | cytosol | 29.84 | 33.71 |
| Zm00001d052387_P001 | Maize | cytosol, nucleus, plasma membrane | 27.87 | 28.14 |
| Zm00001d035592_P001 | Maize | cytosol | 23.72 | 24.24 |
| Zm00001d035591_P002 | Maize | cytosol | 19.57 | 23.13 |
Protein Annotations
| EnsemblPlants:Zm00001d017638_P001 | EnsemblPlants:Zm00001d017638_T001 | EnsemblPlantsGene:Zm00001d017638 | EntrezGene:103627562 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 | ProteinID:AQK73588.1 |
| TMHMM:TMhelix | UniParc:UPI0002219E36 | UniProt:A0A1D6HG32 | MapMan:35.2 | : | : |
Description
Expressed protein; protein
Coordinates
chr5:+:202751395..202752915
Molecular Weight (calculated)
57485.8 Da
IEP (calculated)
5.852
GRAVY (calculated)
-0.158
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPAAAAWVP FNFQLANWTA LFPGEIYGSW MQTRAPDNSS GSGRQLFEYY AAATQHCPIE EEAQDQSFEV ALDLHNLEID NNDAICVFEK VARNFEADIR
101: RTKEKIHRYP ECIRDLGDYY TVPRIVAIGP YHHGKQPLGK AEEVKWVAAY HCIVESGCSP QAMYDAVASA ADNARTLYDK DVMAGIGYDD FRVMMFFDAC
201: FLVQYIVWFT GLENETDPSS WHNFLHLNRS GINHDVWLLE NQLPWSVVEA VMRLRHVNLR KYVEDWRGTL QDRRDLIEKP FVWEDNYDPP HLLGLLRHYA
301: VGRSEKIIDR DLSKEFDSLS FSASAMELAE IGITFRANET AKLVDMGLKK DVLFAELSLA PLSLNHARAS RLVNMAAFEI CTVPSFIDAK VEDSAVCSYL
401: LLLCMLVHRE EDVHELRRQG ILQGGAGLTD KQALKFFASL QSLPDGQCCT LTMLEIENYR IHKKMQTKVY KKRKTIFKVL SITVAAITIF GTLLSISAQL
501: SNVSKG
101: RTKEKIHRYP ECIRDLGDYY TVPRIVAIGP YHHGKQPLGK AEEVKWVAAY HCIVESGCSP QAMYDAVASA ADNARTLYDK DVMAGIGYDD FRVMMFFDAC
201: FLVQYIVWFT GLENETDPSS WHNFLHLNRS GINHDVWLLE NQLPWSVVEA VMRLRHVNLR KYVEDWRGTL QDRRDLIEKP FVWEDNYDPP HLLGLLRHYA
301: VGRSEKIIDR DLSKEFDSLS FSASAMELAE IGITFRANET AKLVDMGLKK DVLFAELSLA PLSLNHARAS RLVNMAAFEI CTVPSFIDAK VEDSAVCSYL
401: LLLCMLVHRE EDVHELRRQG ILQGGAGLTD KQALKFFASL QSLPDGQCCT LTMLEIENYR IHKKMQTKVY KKRKTIFKVL SITVAAITIF GTLLSISAQL
501: SNVSKG
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.