Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035591_P002 | Maize | cytosol | 60.61 | 70.09 |
| Zm00001d024995_P001 | Maize | cytosol | 26.67 | 26.19 |
| Zm00001d052387_P001 | Maize | cytosol, nucleus, plasma membrane | 25.86 | 25.55 |
| Zm00001d048651_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 26.46 | 24.3 |
| Zm00001d052775_P001 | Maize | nucleus | 26.87 | 24.27 |
| Zm00001d017638_P001 | Maize | plasma membrane | 24.24 | 23.72 |
Protein Annotations
| EnsemblPlants:Zm00001d035592_P001 | EnsemblPlants:Zm00001d035592_T001 | EnsemblPlantsGene:Zm00001d035592 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF27 | PFAM:PF03140 | ProteinID:AQK79329.1 | SEG:seg |
| UniParc:UPI00022198A4 | UniProt:A0A1D6LHI1 | MapMan:35.2 | : | : | : |
Description
Expressed protein; protein
Coordinates
chr6:-:35639437..35640924
Molecular Weight (calculated)
54427.1 Da
IEP (calculated)
8.366
GRAVY (calculated)
-0.024
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGNENLVDG VENESQQDAH VAEHAAGGTA SIRRHEVHEA PPPRRYRLPK VRRAFGGPPP PPPHISFQYN SAATIERIPY NLQFIVPRNR NVIAPTAVAI
101: GPYHRALPQL SGMQEAKAAA VAEFCRAAGQ PLAAVRGKML SVAGAARGSY AADGTLVDLD NGEFAEMMLL DGCFLLQFMA SVCRRRDDDP LISRGEVRRS
201: INAIVRDVML LENQIPWLVL SSLMQLMPPP AGSVVNDFLL LMASAFHIVG DISNANSQTG LPAAGELDKP PPPHLLGLFH RRQMDMGAVR TQQHQGSLLR
301: VPFQLASLSS TAVELAEMGV KLAPSKTKTF GDMAMSKRGR RWPLGLFGEL SLAPLVLNRL TECWLLNMAA YELCQPQGDA TDSFPVSSYV TLVSLLVNRP
401: EDVQEMRAKG LVVSVFDDAE TLGFFKALAP HLSVGYRYYE VFQCLQEYRQ ERWLWIAVHR FLYNNIKTIA TVFSIVGVLA GLFKTILSVK QPHGP
101: GPYHRALPQL SGMQEAKAAA VAEFCRAAGQ PLAAVRGKML SVAGAARGSY AADGTLVDLD NGEFAEMMLL DGCFLLQFMA SVCRRRDDDP LISRGEVRRS
201: INAIVRDVML LENQIPWLVL SSLMQLMPPP AGSVVNDFLL LMASAFHIVG DISNANSQTG LPAAGELDKP PPPHLLGLFH RRQMDMGAVR TQQHQGSLLR
301: VPFQLASLSS TAVELAEMGV KLAPSKTKTF GDMAMSKRGR RWPLGLFGEL SLAPLVLNRL TECWLLNMAA YELCQPQGDA TDSFPVSSYV TLVSLLVNRP
401: EDVQEMRAKG LVVSVFDDAE TLGFFKALAP HLSVGYRYYE VFQCLQEYRQ ERWLWIAVHR FLYNNIKTIA TVFSIVGVLA GLFKTILSVK QPHGP
001: METFGTIPPP PPLPPRLELR RQRAPPPQPP PPPPPPPPPP PPRLGPRLRL RLLPPPRQQL LRLRKQQPLV LPEPLPLRPR AIPWLTGHDV KKGKSYDKLR
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SNE9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.