Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84013 | Sorghum | cytosol | 45.26 | 46.79 |
| Zm00001d024995_P001 | Maize | cytosol | 40.69 | 44.25 |
| HORVU1Hr1G084670.1 | Barley | cytosol | 40.33 | 43.59 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 37.77 | 43.31 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 39.42 | 42.69 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 39.42 | 42.69 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 39.96 | 42.44 |
| Zm00001d017638_P001 | Maize | plasma membrane | 39.05 | 42.29 |
| OQU84018 | Sorghum | plasma membrane | 41.42 | 42.04 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 38.5 | 41.54 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 36.86 | 39.61 |
| Zm00001d048651_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 36.5 | 37.11 |
| Os11t0278300-00 | Rice | cytosol | 27.74 | 33.93 |
| Zm00001d052387_P001 | Maize | cytosol, nucleus, plasma membrane | 25.18 | 27.54 |
| Zm00001d035592_P001 | Maize | cytosol | 24.27 | 26.87 |
| Zm00001d035591_P002 | Maize | cytosol | 19.89 | 25.47 |
Protein Annotations
| EnsemblPlants:Zm00001d052775_P001 | EnsemblPlants:Zm00001d052775_T001 | EnsemblPlantsGene:Zm00001d052775 | EntrezGene:103654450 | InterPro:DUF247_pln | ncoils:Coil |
| PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 | ProteinID:AQK58041.1 | SEG:seg | UniParc:UPI00022195DC |
| UniProt:K7U7R8 | MapMan:35.2 | : | : | : | : |
Description
Expressed protein; protein
Coordinates
chr4:-:200464359..200466005
Molecular Weight (calculated)
60919.3 Da
IEP (calculated)
7.302
GRAVY (calculated)
-0.165
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAEAWGAC EFQLSNWTAE GPAAAQVWAP AAVLPHPLDQ YASIDIDADM DMFGACWSLE APVAASMVVG GHGQQLVVRE VGTGVREPTG GNTNISNGSH
101: ASGSSEMLEQ KLSEFKAEIN LMKEKMHRYP ASLQGLSESY TVPRFVAIGP YHHDKPHLKQ AEKVKAMAAI CYVKECGYRL HDMYSAVVSV ADDARRLYDE
201: DAIQGITSVD FQCMMFIDAC FLVQYMRMQS STHVVIDPSL HASMRPNRSD ILHDVLLLEN QLPWKVVQTV KAFLPARATP TSFLPVFISS LRTFLRDQKP
301: AAKDNVPVDW AEGYNPPHLL GLLRYYIVGR KPSWAPQPED GNAGHRTEGS RRLKATSKRS VSHSAIELAK LGIRLIPTKE KTTELIHMGL NMEAGLLHAE
401: FSLQPLSLNR DRASYLVNMA AFELCTVQSF GAAPDEDSAV CSYLLLLAML AYREEDVHEL RVRGLLQGGG GLTNEDALRF FTSLQGLRLG KRYLHVMQQI
501: ARYQENRPKR TKWNEFWYHN KKIVTTVFAC LVSLAGITGT LVSIKNAL
101: ASGSSEMLEQ KLSEFKAEIN LMKEKMHRYP ASLQGLSESY TVPRFVAIGP YHHDKPHLKQ AEKVKAMAAI CYVKECGYRL HDMYSAVVSV ADDARRLYDE
201: DAIQGITSVD FQCMMFIDAC FLVQYMRMQS STHVVIDPSL HASMRPNRSD ILHDVLLLEN QLPWKVVQTV KAFLPARATP TSFLPVFISS LRTFLRDQKP
301: AAKDNVPVDW AEGYNPPHLL GLLRYYIVGR KPSWAPQPED GNAGHRTEGS RRLKATSKRS VSHSAIELAK LGIRLIPTKE KTTELIHMGL NMEAGLLHAE
401: FSLQPLSLNR DRASYLVNMA AFELCTVQSF GAAPDEDSAV CSYLLLLAML AYREEDVHEL RVRGLLQGGG GLTNEDALRF FTSLQGLRLG KRYLHVMQQI
501: ARYQENRPKR TKWNEFWYHN KKIVTTVFAC LVSLAGITGT LVSIKNAL
001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
Arabidopsis Description
At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.