Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84013 | Sorghum | cytosol | 47.04 | 47.92 |
| Zm00001d052775_P001 | Maize | nucleus | 42.04 | 41.42 |
| EES08977 | Sorghum | cytosol | 37.59 | 40.76 |
| HORVU1Hr1G084670.1 | Barley | cytosol | 37.41 | 39.84 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 35.19 | 39.75 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 37.04 | 39.53 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 36.85 | 39.33 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 36.67 | 38.82 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 35.93 | 38.19 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 36.3 | 37.98 |
| OQU84015 | Sorghum | cytosol | 21.11 | 35.4 |
| OQU79618 | Sorghum | cytosol | 25.37 | 31.71 |
| KXG24291 | Sorghum | cytosol, nucleus, peroxisome | 27.96 | 29.61 |
| KXG24308 | Sorghum | cytosol | 24.44 | 29.4 |
| KXG21028 | Sorghum | plastid | 22.04 | 28.74 |
| OQU79990 | Sorghum | nucleus, peroxisome, plastid | 25.0 | 28.18 |
Protein Annotations
| EnsemblPlants:OQU84018 | EnsemblPlantsGene:SORBI_3005G216700 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF247_pln |
| PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 | ProteinID:OQU84018 | ProteinID:OQU84018.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000B8BA4BC | UniProt:A0A1Z5RJW2 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr5:+:70232553..70234577
Molecular Weight (calculated)
60854.0 Da
IEP (calculated)
5.580
GRAVY (calculated)
-0.180
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHGDLNCQF QLANWDVQEP APEAWSCAAG GVPVEYVSID MIGNCNLQPY LPQSCQGHGG QELAEYYSYY AAASLPNWPI AEVINWQNRQ VMGISSKQAV
101: ELQNEETNKI SNNSLVSAVF EQVSDEFQAD IDLMEQKMHR YPASLRDRLS PSIGPYHHHQ PHLKQAEKVK HMAVISCVIE SGHLAEEVYL EVAHVADNHA
201: RRLYDKDVMA GISCADFRDM MFVDACFLVQ YMRMDCGIAI DESLVGFLRP NRRDIRHDLI LLENQLPWKV VETVMNFMPE PAVPLTESFI SVWRGYLQHH
301: KKEEDEEDQD TTYLSTLVKH KKFKPHLLGL LRYYTVGRNT NADDDDNKRE PKNLAISVSA IELAEIGVSL TANKTTKLID MGLNYKGTVL GELSMAPLSL
401: DRNRASFLFN MAALELCTVE SFSNAPVEDS AVCSYLLLLA LLVSRVEDVK ELRARGLLQG GGGLTDMEAF KFFTTFQGLR FGRCYNSVMQ DFELYKESRQ
501: IPSKVYAFYY KHKKIIAAVL GAIIAVSGII GTLLSIKNNV
101: ELQNEETNKI SNNSLVSAVF EQVSDEFQAD IDLMEQKMHR YPASLRDRLS PSIGPYHHHQ PHLKQAEKVK HMAVISCVIE SGHLAEEVYL EVAHVADNHA
201: RRLYDKDVMA GISCADFRDM MFVDACFLVQ YMRMDCGIAI DESLVGFLRP NRRDIRHDLI LLENQLPWKV VETVMNFMPE PAVPLTESFI SVWRGYLQHH
301: KKEEDEEDQD TTYLSTLVKH KKFKPHLLGL LRYYTVGRNT NADDDDNKRE PKNLAISVSA IELAEIGVSL TANKTTKLID MGLNYKGTVL GELSMAPLSL
401: DRNRASFLFN MAALELCTVE SFSNAPVEDS AVCSYLLLLA LLVSRVEDVK ELRARGLLQG GGGLTDMEAF KFFTTFQGLR FGRCYNSVMQ DFELYKESRQ
501: IPSKVYAFYY KHKKIIAAVL GAIIAVSGII GTLLSIKNNV
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.