Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0278300-00 | Rice | cytosol | 46.76 | 45.09 |
| KXG24308 | Sorghum | cytosol | 35.65 | 34.3 |
| KXG21028 | Sorghum | plastid | 30.79 | 32.13 |
| OQU79990 | Sorghum | nucleus, peroxisome, plastid | 35.42 | 31.94 |
| KXG24291 | Sorghum | cytosol, nucleus, peroxisome | 37.5 | 31.76 |
| EES08977 | Sorghum | cytosol | 33.33 | 28.92 |
| OQU84013 | Sorghum | cytosol | 32.64 | 26.6 |
| OQU84018 | Sorghum | plasma membrane | 31.71 | 25.37 |
| OQU84015 | Sorghum | cytosol | 16.44 | 22.05 |
Protein Annotations
| EnsemblPlants:OQU79618 | EnsemblPlantsGene:SORBI_3008G170900 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF247_pln |
| ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF33 | PFAM:PF03140 | ProteinID:OQU79618 | ProteinID:OQU79618.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000B8BA733 | UniProt:A0A1Z5R776 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr8:+:60496434..60502440
Molecular Weight (calculated)
49411.2 Da
IEP (calculated)
6.395
GRAVY (calculated)
-0.123
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAWDSATP VTADQTTVNI TTDHVGDEAA DASSGTIIDK VQEELKRAAD KVEAEFSKNE AKMHRYPPSF RGLMSKDDRY FVPRCVAIGP YHHRAAAYLH
101: QAEEMKRAAA YYFICERQSS GHSAEVIYAR ILSVAGDARS CYDDDAVLAG IIPQADFATM MFQDACFLLQ YIMHANGVAS QLPESLRRWF VANEDSIQRD
201: IFLLENQVPW LVLDTLIYKP AHLLDLLRHC QSGSSSKRRR ISWGLPAESL PEYSSAIDLA EMGIQLKTNR TAKFRDTRLA RGFLFSNLFL APLVMDDLNA
301: CWLVNMLAFE IAAGTRYTNT SYVTSYVLLI AMLMDREEDV HELRVKRILH GDFSDQRTLS FLKDLLDLFD YWTEEHSDFM ADLQDYRRKR WMWISLHKFI
401: YNNLKSIVTV FSIISVLVGI FKTLFSISMK QH
101: QAEEMKRAAA YYFICERQSS GHSAEVIYAR ILSVAGDARS CYDDDAVLAG IIPQADFATM MFQDACFLLQ YIMHANGVAS QLPESLRRWF VANEDSIQRD
201: IFLLENQVPW LVLDTLIYKP AHLLDLLRHC QSGSSSKRRR ISWGLPAESL PEYSSAIDLA EMGIQLKTNR TAKFRDTRLA RGFLFSNLFL APLVMDDLNA
301: CWLVNMLAFE IAAGTRYTNT SYVTSYVLLI AMLMDREEDV HELRVKRILH GDFSDQRTLS FLKDLLDLFD YWTEEHSDFM ADLQDYRRKR WMWISLHKFI
401: YNNLKSIVTV FSIISVLVGI FKTLFSISMK QH
001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
Arabidopsis Description
At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.