Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24291 | Sorghum | cytosol, nucleus, peroxisome | 51.0 | 44.9 |
| OQU79618 | Sorghum | cytosol | 34.3 | 35.65 |
| KXG21028 | Sorghum | plastid | 32.07 | 34.78 |
| EES08977 | Sorghum | cytosol | 33.41 | 30.12 |
| OQU84013 | Sorghum | cytosol | 32.07 | 27.17 |
| OQU79990 | Sorghum | nucleus, peroxisome, plastid | 28.95 | 27.14 |
| OQU84015 | Sorghum | cytosol | 18.93 | 26.4 |
| OQU84018 | Sorghum | plasma membrane | 29.4 | 24.44 |
Protein Annotations
| EnsemblPlants:KXG24308 | EnsemblPlantsGene:SORBI_3007G023900 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF247_pln |
| PANTHER:PTHR31549 | PANTHER:PTHR31549:SF27 | PFAM:PF03140 | ProteinID:KXG24308 | ProteinID:KXG24308.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00081AB5CC | UniProt:A0A1B6PF61 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr7:+:2155055..2156409
Molecular Weight (calculated)
51363.2 Da
IEP (calculated)
8.266
GRAVY (calculated)
-0.128
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTSRTILIR ENSTHEVVLA IDERTALANE RLKAEFYKVD TKIHRFPRSL QGIGGDNDRY IVPSVVAIGP YHHGSPHLQK MEEVKLAAAY HLCRHSGRSS
101: SSMEVYEKIL SVVDDARGSY DVKDPSVFGL SNHEFAAMMF LDGCFLLQYM IGGGDVPVLQ NWMTPSIERD IFLLENQIPW LVLEVLIEFM PVDVLRFVRG
201: VQEKFHPGKA KEKKVRPLPD DDDRGVGGRG DYKPPHLLGL LWYILQIHSM PERVQNYSYR PRPLKSSNAV ELAEIGIRLA PSTKPWFWDM SFRRGRLFAV
301: SLSPVLLNDT TACWLVNLAA LEEANTSAGS GATGEYYDKY VVSSYLFMLA MLMDREEEVQ QMRSKYILYS TLSNKQALSF FKDLADHLRF GDPYLFTLIE
401: IWSYRRQLLI TIYRFIYKNY RAIAAVLSIA GVLCSILNAL YSLKKPYKT
101: SSMEVYEKIL SVVDDARGSY DVKDPSVFGL SNHEFAAMMF LDGCFLLQYM IGGGDVPVLQ NWMTPSIERD IFLLENQIPW LVLEVLIEFM PVDVLRFVRG
201: VQEKFHPGKA KEKKVRPLPD DDDRGVGGRG DYKPPHLLGL LWYILQIHSM PERVQNYSYR PRPLKSSNAV ELAEIGIRLA PSTKPWFWDM SFRRGRLFAV
301: SLSPVLLNDT TACWLVNLAA LEEANTSAGS GATGEYYDKY VVSSYLFMLA MLMDREEEVQ QMRSKYILYS TLSNKQALSF FKDLADHLRF GDPYLFTLIE
401: IWSYRRQLLI TIYRFIYKNY RAIAAVLSIA GVLCSILNAL YSLKKPYKT
001: MVAVFYKDML SWYLLTLKIR EKLETQNQES VLVNQDQNLP GLPEITRSDQ DQNIHNNQQT QSDPAIYVIK ESPKDSRDDW VISITDKLEQ AHRDDDTTLW
101: GKLCIYRVPY YLQENDNKSY FPQTVSLGPY HHGKKRLRSM DRHKWRAVNR VLKRTNQGIK MYIDAMRELE EKARACYEGP LSLSSNEFIE MLVLDGCFVL
201: ELFRGAVEGF TELGYARNDP VFAMRGSMHS IQRDMVMLEN QLPLFVLNRL LELQLGTRNQ TGLVAQLAIR FFDPLMPTDE PLTKSGQSKL ENSLARDKSF
301: DPFADMGELH CLDVFRRSLL RSSPKPEPRL TRKRWSRNTR VADKRRQQLI HCVTELKEAG IKFRRRKTDR FWDMQFKNGY LEIPRLLIHD GTKSLFLNLI
401: AFEQCHIDSS NDITSYIIFM DNLIDSHEDV SYLHYCGIIE HWLGSDSEVA DLFNRLCQEV VFDTEDSYLS RLSIEVNRYY DHKWNAWRAT LKHKYFNNPW
501: AIVSFCAAVI LLVLTFSQSF YAVYAYYKPP S
101: GKLCIYRVPY YLQENDNKSY FPQTVSLGPY HHGKKRLRSM DRHKWRAVNR VLKRTNQGIK MYIDAMRELE EKARACYEGP LSLSSNEFIE MLVLDGCFVL
201: ELFRGAVEGF TELGYARNDP VFAMRGSMHS IQRDMVMLEN QLPLFVLNRL LELQLGTRNQ TGLVAQLAIR FFDPLMPTDE PLTKSGQSKL ENSLARDKSF
301: DPFADMGELH CLDVFRRSLL RSSPKPEPRL TRKRWSRNTR VADKRRQQLI HCVTELKEAG IKFRRRKTDR FWDMQFKNGY LEIPRLLIHD GTKSLFLNLI
401: AFEQCHIDSS NDITSYIIFM DNLIDSHEDV SYLHYCGIIE HWLGSDSEVA DLFNRLCQEV VFDTEDSYLS RLSIEVNRYY DHKWNAWRAT LKHKYFNNPW
501: AIVSFCAAVI LLVLTFSQSF YAVYAYYKPP S
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SN06]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.