CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84018	Sorghum	plasma membrane	47.92	47.04
Zm00001d052775_P001	Maize	nucleus	46.79	45.26
EES08977	Sorghum	cytosol	42.26	44.98
HORVU1Hr1G084670.1	Barley	cytosol	41.7	43.59
OQU84015	Sorghum	cytosol	26.42	43.48
TraesCS1D01G391800.1	Wheat	cytosol, golgi, peroxisome	41.51	43.48
TraesCS1B01G410200.1	Wheat	cytosol, golgi, peroxisome	40.94	42.89
TraesCS1D01G391700.1	Wheat	cytosol	39.06	40.12
TraesCS1A01G383600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	36.04	39.96
TraesCS1B01G410000.1	Wheat	cytosol	38.3	39.8
TraesCS1B01G409900.1	Wheat	cytosol	37.55	39.17
OQU79618	Sorghum	cytosol	26.6	32.64
KXG24308	Sorghum	cytosol	27.17	32.07
OQU79990	Sorghum	nucleus, peroxisome, plastid	26.98	29.85
KXG24291	Sorghum	cytosol, nucleus, peroxisome	28.68	29.8
KXG21028	Sorghum	plastid	22.26	28.5

Protein Annotations

EnsemblPlants:OQU84013	EnsemblPlantsGene:SORBI_3005G216400	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	ProteinID:OQU84013	ProteinID:OQU84013.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000B4250B3	UniProt:A0A1Z5RJS2	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr5:+:70208370..70210838

Molecular Weight (calculated)

59757.1 Da

IEP (calculated)

6.730

GRAVY (calculated)

-0.151

Length

530 amino acids

Sequence
(BLAST)

001: MVMEPAAAWG PSCEFQLANW TVEEPAAEVW APAVGLPLEY ASSDIFGTCP QAYVPESIGE KQLVEFEYNY SSASRHNLSP EAIVVDGQNR HEVVDPQKLE
101: TRIVVSNDSY ATNVFNQVEH AFKVDINLMA EKMHRYPAGL GDTIGESYTV PRIVAIGPYH HHRDHLKQAE KVKHMAAICC VKESGHLLEE MYAAVASIAD
201: NVRCLYDKDV MAGISCVDFR DMMFVDACFL VQYMSMRSRQ KIDNSLHGFL SFNRSNIHHD IKLLENQLPW KVVEVVMRFR PVPLHRFMAI LKEYLQDRKP
301: PKEEDPVFIL DNSYRPPHLL GLLHYYTVGR SRYTSDRTVR PKGQSDSVSA LELAKIGITI TANESMELID MGLSQKGTLF AELSMAPLTL DRDRASYLLN
401: MAALELCMVK SFSKAAVEDS AVCSYLLLLA NLAHRQEDVH ELRVSGLLQG GGGLTDEEAL RFFTNLRNMR HGRSYDRVMA QIEVYKESKW KEAKVYAFYY
501: KNKKTIAAFV TGIGALVGII GTLLSIKKSL

Best Arabidopsis Sequence Match ( AT3G50160.1 )
(BLAST)

001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT

Arabidopsis Description

Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.