Factsheet for TraesCS1A01G383600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, endoplasmic reticulum

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, endoplasmic reticulum, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G410200.1	Wheat	cytosol, golgi, peroxisome	80.96	76.48
TraesCS1D01G391800.1	Wheat	cytosol, golgi, peroxisome	78.03	73.72
HORVU1Hr1G084670.1	Barley	cytosol	70.08	66.08
EES08977	Sorghum	cytosol	46.65	44.78
TraesCS7A01G527400.1	Wheat	cytosol	11.51	43.31
Zm00001d048651_P001	Maize	cytosol, endoplasmic reticulum, plastid	47.7	42.3
Zm00001d017638_P001	Maize	plasma membrane	43.93	41.5
TraesCS7A01G072600.1	Wheat	cytosol, endoplasmic reticulum, nucleus	33.05	38.92
TraesCS4A01G370900.1	Wheat	cytosol	32.85	38.77
Zm00001d052775_P001	Maize	nucleus	43.31	37.77
TraesCS4A01G026800.1	Wheat	cytosol	39.12	37.63
TraesCS7A01G496100.1	Wheat	cytosol, nucleus, plasma membrane	39.54	36.77
TraesCS2A01G419300.1	Wheat	cytosol	36.4	36.25
OQU84013	Sorghum	cytosol	39.96	36.04
TraesCS7A01G527300.1	Wheat	plasma membrane	21.76	35.86
Os11t0278300-00	Rice	cytosol	33.47	35.71
OQU84018	Sorghum	plasma membrane	39.75	35.19
Zm00001d024995_P001	Maize	cytosol	37.03	35.12
TraesCS2A01G426400.1	Wheat	cytosol	35.15	33.8
TraesCS1A01G017500.1	Wheat	cytosol	35.56	33.4
TraesCS2A01G426300.1	Wheat	cytosol	34.31	33.0
TraesCS7A01G527500.1	Wheat	cytosol	30.13	32.51
TraesCS1A01G017600.1	Wheat	cytosol	35.77	31.38
OQU84015	Sorghum	cytosol	21.13	31.37
TraesCS3A01G497000.1	Wheat	cytosol	24.9	26.68

Protein Annotations

EnsemblPlants:TraesCS1A01G383600.1	EnsemblPlantsGene:TraesCS1A01G383600	InterPro:DUF247_pln	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr1A:-:554070938..554072840

Molecular Weight (calculated)

53733.3 Da

IEP (calculated)

4.803

GRAVY (calculated)

-0.254

Length

478 amino acids

Sequence
(BLAST)

001: MADLTGRSME PPAAAWPPCG FPADWSMEPL WIPGYPADSA MCFQTHVPSS SSGGQLQQVQ HAAAIAPNLA IQEEDDEEDN DEEEEEAQYK MEMEIHDPIQ
101: VFTEATHEFK VDIDMRDMKI HRYPASIKRL KGSYTAPATV AVGPYHHGKD RLKPAEKVKH AAANHCIMES GRSVQEMYAA VASVAGEARG LYDKDMVAGI
201: GDDDFLPMMF YDACFLVQYM LTCTSGGSEM DPSLRSYFDG NDSDIFHDIM LLENQLPWLV VKTVMEFRPV PLEEFITYLK DGLQDRKLTE KKERQHQAIE
301: LAEIGITLTA NKTSELIEMG VKNKRVLFAE ISLPPLSLDH ARASWLVNMA AFEVCTTPNF QAVDDEESVV SSYLLLFAML VDREEDVHEL RRKRLLQGGG
401: GLTNKEALDF FTSLQGLPLG SSYIRIMEEI ENYRVKRRTQ TKLHAFVYKN LRIIVTVFSA VGVLAGIFGS LMSLRRRS

Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)

001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK

Arabidopsis Description

At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.