Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G099720.1 | Barley | cytosol | 82.09 | 82.26 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 80.28 | 80.77 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 79.48 | 79.96 |
| TraesCS2A01G419300.1 | Wheat | cytosol | 48.49 | 50.21 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 48.89 | 48.89 |
| TraesCS4A01G370900.1 | Wheat | cytosol | 29.98 | 36.79 |
| TraesCS7A01G072600.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 29.98 | 36.7 |
| TraesCS7A01G527300.1 | Wheat | plasma membrane | 20.93 | 35.86 |
| Os11t0278300-00 | Rice | cytosol | 32.19 | 35.71 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 33.8 | 35.15 |
| TraesCS7A01G527400.1 | Wheat | cytosol | 8.85 | 34.65 |
| TraesCS7A01G527500.1 | Wheat | cytosol | 29.18 | 32.73 |
| TraesCS1A01G017500.1 | Wheat | cytosol | 33.4 | 32.61 |
| TraesCS4A01G026800.1 | Wheat | cytosol | 32.19 | 32.19 |
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 33.2 | 32.1 |
| TraesCS1A01G017600.1 | Wheat | cytosol | 29.78 | 27.16 |
| TraesCS3A01G497000.1 | Wheat | cytosol | 24.35 | 27.13 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G426400.1 | EnsemblPlantsGene:TraesCS2A01G426400 | InterPro:DUF247_pln | ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 |
| PFAM:PF03140 | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:679964380..679965873
Molecular Weight (calculated)
55559.4 Da
IEP (calculated)
5.147
GRAVY (calculated)
-0.236
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPCDYQLA VADYWDGKPA MEPTVWVPGL SLQMTVAAPA SNSDLVVTSS GRQQLKQVDE YDHYAVQVFE RAAESLKSRV EEMDTKMHLF PPSMGDLADE
101: YAAPKVVSIG PYHHGRTPAL QEMESVKHAA ACHFVKATGR PIQEVYWAVC TVAEEARAHY DAGKLRGLGD DDFKPMMFLD GCFLLQYMQF WCRESGGDED
201: PDMDPSLYNA FSSIDRPILS DVVLLENQLP WVVIDALLSF LPQPGLDMET LIGRVKQTLQ TRQVRYFDAP TLDYTPPHLL GLLRHHIVGS NDTKKSEPEL
301: SERAKELSVS VSAMELAEIG IEITATKATR EGAELRNMGV RRSAYLTGEL FLAPLSLNDA NATFLVNMAA LEQCTTPDFF GEDEEKSAVC SYLCLLGMVT
401: DSEEDVQQLR KKGILQGGAG LSNKDALDLL NKLENRLRPG THYLSTMILI QNYKTDRWKR IQFHKFHYNH RKAIFLTFSG IAGFASFLGT LKSLNLK
101: YAAPKVVSIG PYHHGRTPAL QEMESVKHAA ACHFVKATGR PIQEVYWAVC TVAEEARAHY DAGKLRGLGD DDFKPMMFLD GCFLLQYMQF WCRESGGDED
201: PDMDPSLYNA FSSIDRPILS DVVLLENQLP WVVIDALLSF LPQPGLDMET LIGRVKQTLQ TRQVRYFDAP TLDYTPPHLL GLLRHHIVGS NDTKKSEPEL
301: SERAKELSVS VSAMELAEIG IEITATKATR EGAELRNMGV RRSAYLTGEL FLAPLSLNDA NATFLVNMAA LEQCTTPDFF GEDEEKSAVC SYLCLLGMVT
401: DSEEDVQQLR KKGILQGGAG LSNKDALDLL NKLENRLRPG THYLSTMILI QNYKTDRWKR IQFHKFHYNH RKAIFLTFSG IAGFASFLGT LKSLNLK
001: METFGTIPPP PPLPPRLELR RQRAPPPQPP PPPPPPPPPP PPRLGPRLRL RLLPPPRQQL LRLRKQQPLV LPEPLPLRPR AIPWLTGHDV KKGKSYDKLR
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SNE9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.