Factsheet for TraesCS7A01G072600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, endoplasmic reticulum

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus
Any Predictor:	cytosol, endoplasmic reticulum, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G370900.1	Wheat	cytosol	95.81	96.05
HORVU3Hr1G011030.1	Barley	cytosol	69.46	64.68
HORVU3Hr1G011300.1	Barley	cytosol	64.04	59.23
TraesCS3B01G072300.1	Wheat	cytosol	56.4	56.82
TraesCS7A01G527400.1	Wheat	cytosol	13.79	44.09
TraesCS7A01G527300.1	Wheat	plasma membrane	28.33	39.66
TraesCS4A01G026800.1	Wheat	cytosol	46.06	37.63
Os11t0278300-00	Rice	cytosol	41.13	37.28
TraesCS7A01G496100.1	Wheat	cytosol, nucleus, plasma membrane	45.07	35.6
TraesCS7A01G527500.1	Wheat	cytosol	38.67	35.44
TraesCS1A01G383600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	38.92	33.05
TraesCS2A01G426400.1	Wheat	cytosol	36.7	29.98
TraesCS2A01G419300.1	Wheat	cytosol	35.22	29.79
TraesCS1A01G017500.1	Wheat	cytosol	36.21	28.88
TraesCS2A01G426300.1	Wheat	cytosol	33.5	27.36
TraesCS3A01G497000.1	Wheat	cytosol	29.56	26.91
TraesCS1A01G017600.1	Wheat	cytosol	35.96	26.79

Protein Annotations

EnsemblPlants:TraesCS7A01G072600.1	EnsemblPlantsGene:TraesCS7A01G072600	InterPro:DUF247_pln	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr7A:+:38131517..38133567

Molecular Weight (calculated)

46119.1 Da

IEP (calculated)

7.889

GRAVY (calculated)

-0.113

Length

406 amino acids

Sequence
(BLAST)

001: MEWTFHRFPA SLRELDSRYV KPLVVALGPY HHGDTKLQEM ENLKHVAADR FVRASGSELD LEEIFHAVSA VAGVARGLYI GDEVAGMSAD EFATMMLHDA
101: CFLLQYIRVM DSDPRDPADA SLERLFVSNR VCIENDIMLL ENQIPWSVVQ ALNSLGRSPA PVDKFISTMG STFKIRGHRE STQPFRPYTS DRNPPHLLAL
201: FRLEKAGYTR TQGVPPSSSM AITASATELA EMAINIQPCM TSDFMDMGIW IEKLFSHLYL APLFLDETRA CWLVNMAALE VCTASNDRDD DIMKKETAVC
301: SYLALLAMLM NREEDVHELR NKQVVQAKLT DKETLDFFKS VVKRLDGGRL YSGIMAEIDH YKWKRRRRIK VYKFIKKNKR SIIAVLSIIA VLVGIFKTLL
401: SLKTRQ

Best Arabidopsis Sequence Match ( AT3G50160.1 )
(BLAST)

001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT

Arabidopsis Description

Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.