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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plasma membrane 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU3Hr1G011030.1 Barley cytosol 75.4 75.92
TraesCS7A01G072600.1 Wheat cytosol, endoplasmic reticulum, nucleus 59.23 64.04
TraesCS4A01G370900.1 Wheat cytosol 58.77 63.7
TraesCS3B01G072300.1 Wheat cytosol 50.11 54.59
HORVU1Hr1G091250.1 Barley nucleus 42.6 36.74
HORVU6Hr1G094220.1 Barley cytosol 25.97 36.54
Os11t0278300-00 Rice cytosol 36.67 35.94
HORVU4Hr1G066650.2 Barley cytosol 23.23 35.79
HORVU0Hr1G017830.1 Barley cytosol 41.69 34.46
HORVU4Hr1G087220.1 Barley cytosol, peroxisome 34.85 33.48
HORVU1Hr1G084670.1 Barley cytosol 35.76 30.97
HORVU2Hr1G098560.1 Barley cytosol, peroxisome 26.42 30.53
HORVU2Hr1G099720.1 Barley cytosol 33.03 29.23
HORVU1Hr1G001600.1 Barley cytosol 18.68 28.37
HORVU1Hr1G091220.1 Barley cytosol 34.62 28.36
HORVU1Hr1G001690.1 Barley cytosol 31.66 27.74
HORVU1Hr1G001610.1 Barley cytosol 31.66 27.74
HORVU2Hr1G099740.1 Barley cytosol, peroxisome, plastid, vacuole 18.0 27.24
HORVU1Hr1G001700.1 Barley cytosol, nucleus 27.79 26.64
HORVU1Hr1G001680.1 Barley cytosol 15.72 25.27
HORVU1Hr1G001580.1 Barley nucleus 28.7 24.23
HORVU1Hr1G055270.1 Barley cytosol 17.77 23.08
Protein Annotations
EnsemblPlants:HORVU3Hr1G011300.1EnsemblPlantsGene:HORVU3Hr1G011300InterPro:DUF247_plnPANTHER:PTHR31549PANTHER:PTHR31549:SF32PFAM:PF03140
TMHMM:TMhelixUniParc:UPI000294E102UniProt:M0UL51MapMan:35.1::
Description
No Description!
Coordinates
chrchr3H:+:24537536..24539305
Molecular Weight (calculated)
49654.7 Da
IEP (calculated)
8.167
GRAVY (calculated)
-0.033
Length
439 amino acids
Sequence
(BLAST)
001: MATEDIPPGS STRVPVEEWR QTARQLKADS RDMESIFHRF PASLIDLGKQ YIEPLVVAIG PYHHGKPELK EMEKLKGAAA HRFIKDSRRS PEDIHDAVFD
101: IAQQFRRFYV GVSVEVAGMS AHEFATMMLL DACFLLLYVR VMDADSQHTA DAALVSLQRV FISNRVCIEN DIMLLENQIP WSLVEKLNGL SVVRAPVDKF
201: ISIMESTFKI HGHRRSVEPF LQYSGGHGLH LLALFRMEKI GRIRTHGVPE DPTNAITASA TELAQMAIKV QPCDTPDFLD MGIWTGKLSA NLYLAPLFLD
301: ETRACWLVNM AAFEVCTASI EREDALMKRK TAVCSYLALL AMLMNREEDV HELRTKRLVQ ANLTDKETLN FFKSLVKHIN GGKLYTGIMA EISHYKWRKQ
401: TWIKVHGFIK DNKKTIIAVL SIIGVLVGIF KTLLSIKTD
Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)
001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
Arabidopsis Description
At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.