Factsheet for HORVU2Hr1G099740.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, vacuole, peroxisome

Predictor Summary:

plastid 2
cytosol 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, vacuole
Any Predictor:	cytosol, peroxisome, plastid, vacuole
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	51.38	39.21
TraesCS2B01G446700.1	Wheat	cytosol	66.55	37.84
TraesCS2D01G424500.1	Wheat	cytosol	65.86	37.52
HORVU6Hr1G094220.1	Barley	cytosol	34.48	32.05
TraesCS2A01G426300.1	Wheat	cytosol	54.83	31.99
HORVU4Hr1G066650.2	Barley	cytosol	28.97	29.47
HORVU2Hr1G099720.1	Barley	cytosol	50.34	29.44
HORVU1Hr1G001600.1	Barley	cytosol	25.86	25.95
HORVU1Hr1G084670.1	Barley	cytosol	42.41	24.26
HORVU1Hr1G001700.1	Barley	cytosol, nucleus	34.83	22.05
Os11t0278300-00	Rice	cytosol	33.45	21.65
HORVU1Hr1G001580.1	Barley	nucleus	35.52	19.81
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	31.03	19.69
HORVU1Hr1G001610.1	Barley	cytosol	33.79	19.56
HORVU1Hr1G001690.1	Barley	cytosol	33.79	19.56
HORVU1Hr1G091250.1	Barley	nucleus	33.1	18.86
HORVU3Hr1G011030.1	Barley	cytosol	27.93	18.58
HORVU0Hr1G017830.1	Barley	cytosol	33.45	18.27
HORVU3Hr1G011300.1	Barley	cytosol	27.24	18.0
HORVU1Hr1G091220.1	Barley	cytosol	28.28	15.3
HORVU1Hr1G001680.1	Barley	cytosol	9.66	10.26
HORVU1Hr1G055270.1	Barley	cytosol	11.03	9.47

Protein Annotations

EnsemblPlants:HORVU2Hr1G099740.1	EnsemblPlantsGene:HORVU2Hr1G099740	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
ncoils:Coil	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B47BDA2	UniProt:A0A287J5D3	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:688298143..688299882

Molecular Weight (calculated)

32215.1 Da

IEP (calculated)

7.338

GRAVY (calculated)

-0.026

Length

290 amino acids

Sequence
(BLAST)

001: MLSAPSSSAS SVTLCCLRVE NQLPWVVVDK LMKLMPKPGL DMETFVGRVK QCLQTRRHLK FDPPILDESY KPPHLLGLLR FYIVGSTDSS TTDDGSGQGL
101: SDNAKKVSLS VSVIELAEMG IRLTADKTTA EINKMRVTRG WFTGKLFLPP VSLDDANARF LVNMAAFELC ITPDFGEVDD TMSTVCAYLC LLGMVTDNDT
201: DVQELRKKHI LQGGGLTNED ALELFTGLEK HLRPGNCYYN TIVAIENYRS DRRLWIKLYR FGYRNQTAII AVLTTIAGIA GFLGTLKSFQ

Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)

001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK

Arabidopsis Description

At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.