Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G446700.1 | Wheat | cytosol | 90.37 | 90.2 |
| HORVU2Hr1G099740.1 | Barley | cytosol, peroxisome, plastid, vacuole | 37.52 | 65.86 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 48.33 | 49.5 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 47.35 | 49.39 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 46.95 | 48.38 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 36.35 | 36.56 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 21.22 | 35.18 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 35.56 | 35.08 |
| Os11t0278300-00 | Rice | cytosol | 30.84 | 35.04 |
| TraesCS1D01G017300.1 | Wheat | cytosol | 33.99 | 33.99 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 31.83 | 32.86 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 22.2 | 30.29 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 25.93 | 29.6 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 24.95 | 29.2 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 26.92 | 28.72 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 31.83 | 27.84 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 23.38 | 27.8 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G424500.1 | EnsemblPlantsGene:TraesCS2D01G424500 | InterPro:DUF247_pln | ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 |
| PFAM:PF03140 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2D:+:537329942..537331471
Molecular Weight (calculated)
57889.4 Da
IEP (calculated)
5.548
GRAVY (calculated)
-0.266
Length
509 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVPYDYQYQ LAVADYWEGR ATMEPNVWVP ALPLQMTVAA PASNTDLVVS SSEQQELKLV EKGTDYQYEC SNPIEDFEKA ARAFEDNLQQ METKMHLFPP
101: SMEELSKYSK PKVVSIGPYH HGSNEAIQQM ESTKYAAACH FIKESRRPVE EVYGAVFAVA VEARSYYDAD RLRDLSDNDF KPMMFYDGCF LLQYMLFLCR
201: DNGDEEKPTA EVDQWLYNAF SSIDRRIFSD IVLLENQLPW VVVQKLKDFM PRPGLDMETV LGRVKHSLQA RRHLKFDAPK LDDSYVPPHL LGYLRFYIVG
301: STDDTSSTSR TPVPEITLSE KVKKLSMSVS VIELAEMGIK LRADDATAEL KKMRITNEWF TGKLFLPPVS LDDANARFLV NMAALELCIT PDFRVAHDTR
401: STVCSYLSLL GMVTDNDTDV QELRNKLILQ GGGGLTNGDA LKLFTGLEKY LRPGNCYDNI IIAIENYRSH RRLRIKVYRF CYRNRTAIIA TVSAIAGLAG
501: FLGTLKSFQ
101: SMEELSKYSK PKVVSIGPYH HGSNEAIQQM ESTKYAAACH FIKESRRPVE EVYGAVFAVA VEARSYYDAD RLRDLSDNDF KPMMFYDGCF LLQYMLFLCR
201: DNGDEEKPTA EVDQWLYNAF SSIDRRIFSD IVLLENQLPW VVVQKLKDFM PRPGLDMETV LGRVKHSLQA RRHLKFDAPK LDDSYVPPHL LGYLRFYIVG
301: STDDTSSTSR TPVPEITLSE KVKKLSMSVS VIELAEMGIK LRADDATAEL KKMRITNEWF TGKLFLPPVS LDDANARFLV NMAALELCIT PDFRVAHDTR
401: STVCSYLSLL GMVTDNDTDV QELRNKLILQ GGGGLTNGDA LKLFTGLEKY LRPGNCYDNI IIAIENYRSH RRLRIKVYRF CYRNRTAIIA TVSAIAGLAG
501: FLGTLKSFQ
001: MEDETRSTSS LSDIAISIID EGPLSPLRQR SERSVVSHIK RNLQSSGKPL ILLESAGKAS CCIFRIPDSL AEVNPKAYKP KVVSIGPYHY GENHLQMIQQ
101: HKFRFLELFV DRATKKGMDE NVLYAAVGAL QHKIRASYSE ELRIEKSELV SMMILDGCFI LMLLLIVSRK IDLDMNKDPI FTIPWILASI QSDLLLLENQ
201: VPFFVLRTIF DKSGIGSPGD LNRMAFSFFN LSIDKPDTYW AKHRDRGAKH LLDLNRKTFI PSMRSMGESE TTPSSKFQHS KGKSGEVSSS ESTFPLILSA
301: KRLRLQGIKF RLRSDAESIL DIKLKKNKLQ IPLLRLDGFI SSIFLNCVAF EQFYTESTND ITSYVVFMGC LLNDQEDATF LNNDKRIIEN YFGNENEVSQ
401: FFKTICKDVV FDTRRSYLRN VFEGVNEYTS KTYNGVWAGF RHTHFESPWT ALSSFAVVFV ILLTMTQAAY AIRSYYHDTE
101: HKFRFLELFV DRATKKGMDE NVLYAAVGAL QHKIRASYSE ELRIEKSELV SMMILDGCFI LMLLLIVSRK IDLDMNKDPI FTIPWILASI QSDLLLLENQ
201: VPFFVLRTIF DKSGIGSPGD LNRMAFSFFN LSIDKPDTYW AKHRDRGAKH LLDLNRKTFI PSMRSMGESE TTPSSKFQHS KGKSGEVSSS ESTFPLILSA
301: KRLRLQGIKF RLRSDAESIL DIKLKKNKLQ IPLLRLDGFI SSIFLNCVAF EQFYTESTND ITSYVVFMGC LLNDQEDATF LNNDKRIIEN YFGNENEVSQ
401: FFKTICKDVV FDTRRSYLRN VFEGVNEYTS KTYNGVWAGF RHTHFESPWT ALSSFAVVFV ILLTMTQAAY AIRSYYHDTE
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SD48]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.