Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G017300.1 | Wheat | cytosol | 59.84 | 57.96 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 48.48 | 54.94 |
| HORVU1Hr1G001690.1 | Barley | cytosol | 54.97 | 54.09 |
| HORVU1Hr1G001610.1 | Barley | cytosol | 54.97 | 54.09 |
| HORVU1Hr1G055270.1 | Barley | cytosol | 33.87 | 49.41 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 36.51 | 35.57 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 35.7 | 34.11 |
| Os11t0278300-00 | Rice | cytosol | 29.82 | 32.81 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.25 | 32.58 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 32.86 | 31.83 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 30.43 | 30.36 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 22.72 | 30.03 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 25.76 | 28.48 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 33.06 | 28.01 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 17.24 | 27.69 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 23.73 | 27.34 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 25.96 | 26.83 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G017100.1 | EnsemblPlantsGene:TraesCS1D01G017100 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr1D:+:7715736..7717217
Molecular Weight (calculated)
55635.4 Da
IEP (calculated)
5.331
GRAVY (calculated)
-0.057
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEPSRVVT CGPGWSMEEA AAWSSDDRIS FQTSLPSHSD SVQLQVVEYA APAPAPATHD KDCSYPIQVF KEAEQAFHAD YSLDSMEQKI HRFPPSLVDV
101: LDRYKVPVTV AIGPYHHGSH SGVMEAERVK HMAANQCIKD SGRSLQEMYN EVSFVSQVAR SRYYDVASLR EDDFLPMMFF DACFLVQFMR SYDEDSGHMD
201: DALLGYFYAN FERIYTDIMM LENQIPWVVV KTILSFMLPE PSLWPLKKFI VAMRSCLKNQ GDEKQIEKDD IIVDPGYEPP HLLGLVWFYI VGENKKGEMP
301: IGDQPMSLSM SVAELLDVGI TLVPKTETEA GLVDMGLERK HHFFGVLSVP PLCLTDANAT WLVNMAAFEL CRTSDFDEID DGNSAVCSYL QLFVMLLDKK
401: QHVHDLRERG VIQGGGLTSS ETLLFFICIG KNMRVGRNYL KIMVKVEDFK QKMTCCVKLW LSIKKNRTRI VTVISAIGVV IGILSSLPAL KPR
101: LDRYKVPVTV AIGPYHHGSH SGVMEAERVK HMAANQCIKD SGRSLQEMYN EVSFVSQVAR SRYYDVASLR EDDFLPMMFF DACFLVQFMR SYDEDSGHMD
201: DALLGYFYAN FERIYTDIMM LENQIPWVVV KTILSFMLPE PSLWPLKKFI VAMRSCLKNQ GDEKQIEKDD IIVDPGYEPP HLLGLVWFYI VGENKKGEMP
301: IGDQPMSLSM SVAELLDVGI TLVPKTETEA GLVDMGLERK HHFFGVLSVP PLCLTDANAT WLVNMAAFEL CRTSDFDEID DGNSAVCSYL QLFVMLLDKK
401: QHVHDLRERG VIQGGGLTSS ETLLFFICIG KNMRVGRNYL KIMVKVEDFK QKMTCCVKLW LSIKKNRTRI VTVISAIGVV IGILSSLPAL KPR
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.