Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G497000.1 | Wheat | cytosol | 67.52 | 64.8 |
| Os01t0564600-00 | Rice | cytosol | 45.56 | 49.12 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 23.83 | 33.22 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 31.54 | 30.27 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 22.43 | 25.74 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 28.5 | 25.58 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 28.97 | 24.51 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 27.34 | 23.73 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 28.27 | 23.45 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 27.8 | 23.38 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 26.87 | 23.28 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 25.7 | 22.54 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 29.91 | 21.99 |
| TraesCS1D01G017300.1 | Wheat | cytosol | 25.7 | 21.61 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 21.03 | 20.69 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G503500.1 | EnsemblPlantsGene:TraesCS3D01G503500 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF27 | PFAM:PF03140 |
| TMHMM:TMhelix | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:591397073..591398359
Molecular Weight (calculated)
48967.8 Da
IEP (calculated)
8.873
GRAVY (calculated)
-0.161
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPGSEHLDR VLLAMNSTTI TTLNHSFDSG GKPRIQKVPA FLRSIQNADR LYSPDIIAIG PCHRGKEQLQ GMEDIKKMAA MEFCCTTQHQ IRAFYRNVRE
101: VVVQARESYA EDLSAYNDDQ FTEMMFYDGC FLLQFMTMVA LDRGPPLQWK MPKLSENWVR RISRDILLVE NQVPWVVLEA LMRLKHVLVD RYIADAIRNF
201: DVQWAKPQMD FEGADKYKPF HLLDLVRHRQ LGPLTKAKLD EAPRPMLNIC SALELAEVGI KLSASKTARF GDIGVGKSPI FGKLRLPPVY LGELTMCWLT
301: NMAAFEMLQG GTSDYGVSSY VQIMSVLMNR EDDVRELRTK RILYPVLSDL ETLNFFKSIS PFLPYGSQYF RILQQLSDYH QDRKARVTLH KLLYNNLKYI
401: LTAGSALGFL IPILRGILTL QQNKPSAA
101: VVVQARESYA EDLSAYNDDQ FTEMMFYDGC FLLQFMTMVA LDRGPPLQWK MPKLSENWVR RISRDILLVE NQVPWVVLEA LMRLKHVLVD RYIADAIRNF
201: DVQWAKPQMD FEGADKYKPF HLLDLVRHRQ LGPLTKAKLD EAPRPMLNIC SALELAEVGI KLSASKTARF GDIGVGKSPI FGKLRLPPVY LGELTMCWLT
301: NMAAFEMLQG GTSDYGVSSY VQIMSVLMNR EDDVRELRTK RILYPVLSDL ETLNFFKSIS PFLPYGSQYF RILQQLSDYH QDRKARVTLH KLLYNNLKYI
401: LTAGSALGFL IPILRGILTL QQNKPSAA
001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
Arabidopsis Description
At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.