Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G512000.1 | Wheat | cytosol | 35.05 | 54.69 |
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 47.42 | 53.7 |
| HORVU0Hr1G017830.1 | Barley | cytosol | 47.77 | 52.35 |
| HORVU6Hr1G094220.1 | Barley | cytosol | 28.01 | 52.24 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 46.91 | 45.27 |
| TraesCS7D01G310500.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 21.82 | 41.37 |
| TraesCS1D01G391800.1 | Wheat | cytosol, golgi, peroxisome | 35.22 | 40.51 |
| Os11t0278300-00 | Rice | cytosol | 28.87 | 37.5 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 28.18 | 36.77 |
| TraesCS1D01G391700.1 | Wheat | cytosol | 31.79 | 35.85 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 28.87 | 35.22 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 29.04 | 34.63 |
| TraesCS2D01G424600.1 | Wheat | cytosol | 28.69 | 33.81 |
| TraesCS1D01G017100.1 | Wheat | cytosol | 28.01 | 33.06 |
| TraesCS1D01G017300.1 | Wheat | cytosol | 28.35 | 32.42 |
| TraesCS2D01G424500.1 | Wheat | cytosol | 27.84 | 31.83 |
| TraesCS3D01G503500.1 | Wheat | cytosol | 21.99 | 29.91 |
| TraesCS1D01G015700.1 | Wheat | cytosol, peroxisome, plasma membrane | 22.16 | 29.66 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G400600.1 | EnsemblPlantsGene:TraesCS6D01G400600 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6D:+:470288675..470290934
Molecular Weight (calculated)
65363.7 Da
IEP (calculated)
6.028
GRAVY (calculated)
-0.170
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPSGARGG NIPADPMADT VEEAVAPVEQ HLKWTKEDEE SDAALSAPLM SSLQQVDSIG ETMDSAEAAP TPVEKEEDEE YLQKAAQELR SSDSEIVDVG
101: DISSCSREHV DEGLDNDLMK AAEEFKIDFH KRKEQMHRFP ASLRSLDSQY TEPRVVAIGP YHHGKPHLLE VEKVKHVAAA QFTHESGRSI EEIYGAVCEV
201: ADEARRLYGH DSAVAGISNV DFNPMMFYDA CFVLEFLHTI SDEHEEQLLS EEALLYFFRS NEEQIICDIM LLENQLPWVV VEALMNFRSV PVQVKMIISR
301: MGKGLTNRKY HIHTGPEETI SDLHEEYNPP HLLGLLRFYK ISSKISTKVS KNVKIANKIS CIIHVFSILN RLKVWLIGAH KEMRIPSAKN KSMKTLGSMS
401: ISTGAIELAE IGIKLKASKS GSFTEMAIRK GPLFGELSLT PLVLSATNAC LLANMAAFEV CTTSGDLSDD KGTAVCSYLA LVSMLMDQKE DVRDLRRKHL
501: VQGELTNQEV FDFFKTLTRH LPVGHSFLLV LTSIEKYQVN RWMWIKVHRF IYKYFKTIAT VFSVVGVLVG IFKTLLSLRK HQ
101: DISSCSREHV DEGLDNDLMK AAEEFKIDFH KRKEQMHRFP ASLRSLDSQY TEPRVVAIGP YHHGKPHLLE VEKVKHVAAA QFTHESGRSI EEIYGAVCEV
201: ADEARRLYGH DSAVAGISNV DFNPMMFYDA CFVLEFLHTI SDEHEEQLLS EEALLYFFRS NEEQIICDIM LLENQLPWVV VEALMNFRSV PVQVKMIISR
301: MGKGLTNRKY HIHTGPEETI SDLHEEYNPP HLLGLLRFYK ISSKISTKVS KNVKIANKIS CIIHVFSILN RLKVWLIGAH KEMRIPSAKN KSMKTLGSMS
401: ISTGAIELAE IGIKLKASKS GSFTEMAIRK GPLFGELSLT PLVLSATNAC LLANMAAFEV CTTSGDLSDD KGTAVCSYLA LVSMLMDQKE DVRDLRRKHL
501: VQGELTNQEV FDFFKTLTRH LPVGHSFLLV LTSIEKYQVN RWMWIKVHRF IYKYFKTIAT VFSVVGVLVG IFKTLLSLRK HQ
001: MATPSKRRPP PPPPPPPRLL VLPPLPPPPP PPPPQLPFGP KLPFPHIIIR RKARRNYQLR PMLTWYFLTF MMRQKLQTRN QQPEETREEW VIWIKDKMEQ
101: VMRDAATTSW DKICIYRVPL SLKKSDKNSY FPQAVSLGPY HHGDEHLRPM DYHKWRAVNM VMKRTKQGIE MYIDAMKELE ERARACYEGP IGLSSNKFTQ
201: MLVLDGCFVL DLFRGAYEGF SKLGYDRNDP VFAMRGSMHS IRRDMLMLEN QLPLFVLNRL LELQLGTQYQ TGLVAQLAVR FFNPLMPTYM SSTKIENSQE
301: NNNKFFNPIA DKEKEELHCL DVFRRSLLQP SLKPDPRLSR SRWSRKPLVA DKRQQQLLHC VTELREAGIK FKRRKSDRFW DIQFKNGCLE IPKLLIHDGT
401: KSLFSNLIAY EQCHIDSTND ITSYIIFMDN LIDSAEDIRY LHYYDIIEHW LGNDSEVADV FNRLCQEVAF DLENTYLSEL SNKVDRYYNR KWNVLKATLK
501: HKYFSNPWAY FSFFAAVILL LLTLFQSFFT SYPYFKPPS
101: VMRDAATTSW DKICIYRVPL SLKKSDKNSY FPQAVSLGPY HHGDEHLRPM DYHKWRAVNM VMKRTKQGIE MYIDAMKELE ERARACYEGP IGLSSNKFTQ
201: MLVLDGCFVL DLFRGAYEGF SKLGYDRNDP VFAMRGSMHS IRRDMLMLEN QLPLFVLNRL LELQLGTQYQ TGLVAQLAVR FFNPLMPTYM SSTKIENSQE
301: NNNKFFNPIA DKEKEELHCL DVFRRSLLQP SLKPDPRLSR SRWSRKPLVA DKRQQQLLHC VTELREAGIK FKRRKSDRFW DIQFKNGCLE IPKLLIHDGT
401: KSLFSNLIAY EQCHIDSTND ITSYIIFMDN LIDSAEDIRY LHYYDIIEHW LGNDSEVADV FNRLCQEVAF DLENTYLSEL SNKVDRYYNR KWNVLKATLK
501: HKYFSNPWAY FSFFAAVILL LLTLFQSFFT SYPYFKPPS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:F4IZB4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.