Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 51.08 | 59.92 |
| HORVU0Hr1G017830.1 | Barley | cytosol | 51.91 | 58.95 |
| TraesCS3D01G512000.1 | Wheat | cytosol | 35.32 | 57.1 |
| HORVU6Hr1G094220.1 | Barley | cytosol | 29.52 | 57.05 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 45.27 | 46.91 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 22.22 | 43.65 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 28.19 | 42.18 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 30.51 | 40.71 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 28.52 | 40.28 |
| Os11t0278300-00 | Rice | cytosol | 29.52 | 39.73 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 33.33 | 39.72 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 32.34 | 38.39 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 31.84 | 37.65 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 26.53 | 37.38 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 30.35 | 35.33 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 29.02 | 34.05 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 30.85 | 33.76 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 28.36 | 33.53 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 28.19 | 33.01 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 27.03 | 33.0 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 26.04 | 31.21 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G466100.1 | EnsemblPlantsGene:TraesCS6B01G466100 | InterPro:DUF247_pln | ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 |
| PFAM:PF03140 | SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:-:716499370..716501698
Molecular Weight (calculated)
68022.2 Da
IEP (calculated)
7.471
GRAVY (calculated)
-0.201
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLSGTTRS CCDPPADSTV EAVEEAVAPT EHHSKLKKAA DFSVEIADVC DTPSQQVDST VQTTMDSAEA APAPVEECLK KAAQEFKCAS SSEITDGHEI
101: HGCSREQVDE GMDFAETALL ASAPVDNDYL EKTAQEFKVD FNKREEKMHR FPASLRGLGS PYIVPRVVAI GPYHHGSPHL QQMEKAKGMA AYHFISGSRG
201: HSLEEIYGAV VKVADKARCL YAEDAVAGIS HADFAAIMFY DACFLLEFML GNKDLLDCPE LRYVFHSNEK FIINDVILLE NQLPWMVVEA LLNFRFVPVK
301: RKLLNFGENL TNRVYHIKQG EILSDLEEEY TPPHLLGLLR FYKTNKERAT KIKMANKKAK RASKIAFPAS LLKEVFTILK ELNTRMMAES NNLEDVHIES
401: HVPLTKKKSR KKLNSVSTST NVIELAEIGI KLKAIRTGIF TEIGIRKGPL FGELFLTPLM LSSARASWLV NMAALEVCTS SGGQRRYQHC DEEMAICSYI
501: ALLSMLMDRE EDVHELRRKH IVQGELTNKE VLQLFKSLTK HLTSSRSYRR ILRDIESYKV NRWLWIKVHK FIYNNFRTIV TVFSVVGVLV GIFKTLLSLK
601: QHQ
101: HGCSREQVDE GMDFAETALL ASAPVDNDYL EKTAQEFKVD FNKREEKMHR FPASLRGLGS PYIVPRVVAI GPYHHGSPHL QQMEKAKGMA AYHFISGSRG
201: HSLEEIYGAV VKVADKARCL YAEDAVAGIS HADFAAIMFY DACFLLEFML GNKDLLDCPE LRYVFHSNEK FIINDVILLE NQLPWMVVEA LLNFRFVPVK
301: RKLLNFGENL TNRVYHIKQG EILSDLEEEY TPPHLLGLLR FYKTNKERAT KIKMANKKAK RASKIAFPAS LLKEVFTILK ELNTRMMAES NNLEDVHIES
401: HVPLTKKKSR KKLNSVSTST NVIELAEIGI KLKAIRTGIF TEIGIRKGPL FGELFLTPLM LSSARASWLV NMAALEVCTS SGGQRRYQHC DEEMAICSYI
501: ALLSMLMDRE EDVHELRRKH IVQGELTNKE VLQLFKSLTK HLTSSRSYRR ILRDIESYKV NRWLWIKVHK FIYNNFRTIV TVFSVVGVLV GIFKTLLSLK
601: QHQ
001: MADKTDIISS SSDKASPPPP SAFRNYLSSG SKEPVLLLES AGKESCCIFR VPESFVALNP KAYKPKVVSI GPYHYGEKHL QMIQQHKPRL LQLFLDEAKK
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP
Arabidopsis Description
UPF0481 protein At3g47200 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD53]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.