Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G214600.1 | Wheat | extracellular | 25.24 | 42.35 |
| HORVU4Hr1G087220.1 | Barley | cytosol, peroxisome | 36.5 | 41.14 |
| TraesCS7D01G424700.1 | Wheat | peroxisome | 35.15 | 40.58 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 30.29 | 36.53 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 30.68 | 34.96 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 26.41 | 33.75 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 31.84 | 32.41 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 26.41 | 31.78 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 31.26 | 31.57 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 29.13 | 29.53 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 27.57 | 28.74 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 30.49 | 28.49 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 33.01 | 28.19 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 27.57 | 27.63 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 26.41 | 27.04 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 26.99 | 26.83 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 25.63 | 25.88 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G397600.1 | EnsemblPlantsGene:TraesCS6B01G397600 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6B:-:673330968..673332653
Molecular Weight (calculated)
58243.9 Da
IEP (calculated)
8.644
GRAVY (calculated)
-0.089
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MAELHPADLA LPLPPTTTQA TPTDSISTAA TEISIDPHEM PKFNEERRKW EARDRAWGHY SDLQLKMHRF PPSLRGFCEG RNYIVPKMVA IGPYHRHLPE
101: LQAMEKVKKK APLFFCQGAS VEAYEKNLAY ISSEVRSFYD ADSLEGVSDT DFASMMFHDA CFLLATILAM TVPEEARNLP FLCLAAGNAP VVMTDMFLLE
201: NQIPWVVLER LMAFRKIGLP DLSAFIAMMG MNVQSRIDRE ARPLDIRTYV PPHLLGLFRF YQSGNVRDRQ PAAKQPAREV LLELEVPEVK YPWIMTKMQS
301: GSPWETATAG RATLTGSTDT GKPTGAAPAG SVLEKLPLGT SAIELAEIGV KVTVSKTSEF RDIGVTEGPL FRNIFLPSLR LNENTACWLV NMAAFEAITA
401: LFERDYIVSS YLSLFAMFMD REEDVHKLRA KRLIHGEFTN RQTLDFFKGR HAGNLLAGDD FYRILRRLER YKQRRWLWIA IHKFVYKNIK IIVAVLSIIG
501: VLAGIFKALL SVKQH
101: LQAMEKVKKK APLFFCQGAS VEAYEKNLAY ISSEVRSFYD ADSLEGVSDT DFASMMFHDA CFLLATILAM TVPEEARNLP FLCLAAGNAP VVMTDMFLLE
201: NQIPWVVLER LMAFRKIGLP DLSAFIAMMG MNVQSRIDRE ARPLDIRTYV PPHLLGLFRF YQSGNVRDRQ PAAKQPAREV LLELEVPEVK YPWIMTKMQS
301: GSPWETATAG RATLTGSTDT GKPTGAAPAG SVLEKLPLGT SAIELAEIGV KVTVSKTSEF RDIGVTEGPL FRNIFLPSLR LNENTACWLV NMAAFEAITA
401: LFERDYIVSS YLSLFAMFMD REEDVHKLRA KRLIHGEFTN RQTLDFFKGR HAGNLLAGDD FYRILRRLER YKQRRWLWIA IHKFVYKNIK IIVAVLSIIG
501: VLAGIFKALL SVKQH
001: MADKTDIISS SSDKASPPPP SAFRNYLSSG SKEPVLLLES AGKESCCIFR VPESFVALNP KAYKPKVVSI GPYHYGEKHL QMIQQHKPRL LQLFLDEAKK
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP
Arabidopsis Description
UPF0481 protein At3g47200 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD53]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.