Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G424500.1 | Wheat | cytosol | 90.2 | 90.37 |
| HORVU2Hr1G099740.1 | Barley | cytosol, peroxisome, plastid, vacuole | 37.84 | 66.55 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 50.0 | 51.31 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 51.76 | 50.97 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 48.63 | 50.2 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 48.82 | 48.44 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 38.24 | 38.54 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 35.69 | 35.69 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 21.37 | 35.5 |
| Os11t0278300-00 | Rice | cytosol | 30.98 | 35.27 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 35.1 | 35.24 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 26.47 | 33.5 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 32.16 | 32.6 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 26.86 | 32.08 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 26.86 | 30.31 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 24.51 | 29.21 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 33.53 | 28.36 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 25.88 | 25.63 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 25.69 | 23.77 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G446700.1 | EnsemblPlantsGene:TraesCS2B01G446700 | InterPro:DUF247_pln | ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 |
| PFAM:PF03140 | SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:639497793..639499325
Molecular Weight (calculated)
57761.5 Da
IEP (calculated)
6.045
GRAVY (calculated)
-0.233
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAPYEYQLA VADFWDGRAT MEPNVWVPAL PLQMTVAAPA SNTDLVVSSS GQQELKLVEE SPEYQHEWSN PIEVFEKAAL AFEDNLQQME TKMHLFPPSM
101: EELSKYSKPK VVSIGPYHHG STEAIRQMES TKYAAACHFI KESRRSVEEV YGAVFTVAGQ ARSYYDADKL RELGVGDKDF KPMMFYDGCF LLQYMLFLCR
201: ENGDEEKPTA EVDPWLYNAF SSIDRRIFSD IVLLENQLPW VVVQKLKDFM PPPGLDMETV LGRVKHSLQA RRHLKFDAPK LDDSYVPPHL LGYLRFYIVG
301: STDDTGSTSR RTPVPEITLS EKVKKLSMSV SVIELAEMGI KLRADDATAE LKKMRITKEW FTGKLFLPPV SLDDANARFL VNMAALELCI TPDFRVAHDT
401: RSTVCSYLSL LGMVTDNDTD VQELRNKLIL QGGGGLTNED ALKLFTGLEK YLRPGNCYDN IIVAIENYRS HRRLRIKVYR FCYRNRTAII ATVSAIAGLA
501: GFLGTLKSFQ
101: EELSKYSKPK VVSIGPYHHG STEAIRQMES TKYAAACHFI KESRRSVEEV YGAVFTVAGQ ARSYYDADKL RELGVGDKDF KPMMFYDGCF LLQYMLFLCR
201: ENGDEEKPTA EVDPWLYNAF SSIDRRIFSD IVLLENQLPW VVVQKLKDFM PPPGLDMETV LGRVKHSLQA RRHLKFDAPK LDDSYVPPHL LGYLRFYIVG
301: STDDTGSTSR RTPVPEITLS EKVKKLSMSV SVIELAEMGI KLRADDATAE LKKMRITKEW FTGKLFLPPV SLDDANARFL VNMAALELCI TPDFRVAHDT
401: RSTVCSYLSL LGMVTDNDTD VQELRNKLIL QGGGGLTNED ALKLFTGLEK YLRPGNCYDN IIVAIENYRS HRRLRIKVYR FCYRNRTAII ATVSAIAGLA
501: GFLGTLKSFQ
001: MADKTDIISS SSDKASPPPP SAFRNYLSSG SKEPVLLLES AGKESCCIFR VPESFVALNP KAYKPKVVSI GPYHYGEKHL QMIQQHKPRL LQLFLDEAKK
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP
Arabidopsis Description
UPF0481 protein At3g47200 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD53]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.