Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G062800.1 | Wheat | cytosol | 47.73 | 58.19 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 21.6 | 38.76 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 27.22 | 37.22 |
| Os11t0278300-00 | Rice | cytosol | 30.13 | 37.05 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 26.13 | 33.72 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 25.41 | 32.71 |
| TraesCS1D01G424200.1 | Wheat | plasma membrane | 27.77 | 32.08 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 33.76 | 30.85 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 28.31 | 30.83 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 28.49 | 30.49 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 28.13 | 30.39 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 25.41 | 27.83 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 25.95 | 27.82 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 25.59 | 27.76 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 24.14 | 26.92 |
| HORVU1Hr1G091220.1 | Barley | cytosol | 25.95 | 26.68 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 23.77 | 25.69 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 23.77 | 25.29 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G062700.1 | EnsemblPlantsGene:TraesCS6B01G062700 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr6B:-:41767398..41769053
Molecular Weight (calculated)
61901.2 Da
IEP (calculated)
6.469
GRAVY (calculated)
-0.124
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQMTNLSLV VSSKKSGGKE MADLSDNPSS SHGQAGSMIE AVDHGEDVGM PDVMRQIVKE LESLEMGRKI ERFPSSLPRL PGMEKAKGVS GYTLTRDLDK
101: SREEMYSPVI VEGKDMPDLP DNPPSSSHGQ AGSMMKVVYH GEDVEMADAN AIHKLVKEFE KESLEIDMKI HRFPAILADM GDQFVIPMAL AIGPYHHGLS
201: RLQGMEKAKR VAAYTLTRDS GKSYKEMYAR LLAVADQARR LYDEDAVFDI SKSKFADMMF HDACFLLQYM QLFSSEEDVI EQSPLHRFFL SNAACIDNDI
301: MLLENQMPWS VIQALITDTK VVVDDFIAHV FFSSSDYNNI APSDLPPHLL GLLRLLKHGR LGKTPDVLPY APPSPIRAME LERIGIKLDH SETGAFTDIG
401: FSKGFLFDKL FLPPLIMSRT RASWLANMVA FEVCTGSENK GNAYICSYVA IFAMLMVREE DVHKLRSKGF IEGELSDKQI LEFFKRLTQQ MTPGHDYFKI
501: LFAIGDCKRR RWLRIMVWKF VSDNAKAIAV VLSIIGVLVG IFKALFSLKQ H
101: SREEMYSPVI VEGKDMPDLP DNPPSSSHGQ AGSMMKVVYH GEDVEMADAN AIHKLVKEFE KESLEIDMKI HRFPAILADM GDQFVIPMAL AIGPYHHGLS
201: RLQGMEKAKR VAAYTLTRDS GKSYKEMYAR LLAVADQARR LYDEDAVFDI SKSKFADMMF HDACFLLQYM QLFSSEEDVI EQSPLHRFFL SNAACIDNDI
301: MLLENQMPWS VIQALITDTK VVVDDFIAHV FFSSSDYNNI APSDLPPHLL GLLRLLKHGR LGKTPDVLPY APPSPIRAME LERIGIKLDH SETGAFTDIG
401: FSKGFLFDKL FLPPLIMSRT RASWLANMVA FEVCTGSENK GNAYICSYVA IFAMLMVREE DVHKLRSKGF IEGELSDKQI LEFFKRLTQQ MTPGHDYFKI
501: LFAIGDCKRR RWLRIMVWKF VSDNAKAIAV VLSIIGVLVG IFKALFSLKQ H
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.