Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G527400.1 | Wheat | cytosol | 23.18 | 77.95 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 40.75 | 56.68 |
| Os08t0121500-00 | Rice | cytosol | 29.98 | 46.72 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 35.6 | 33.63 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 31.38 | 33.25 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 31.62 | 31.54 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 36.53 | 30.29 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 34.43 | 29.05 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 33.49 | 28.95 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 40.28 | 28.52 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 33.72 | 28.35 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 33.49 | 28.04 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 33.96 | 27.99 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 33.49 | 27.82 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 32.08 | 27.24 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 32.08 | 26.86 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 33.72 | 26.13 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G444300.1 | EnsemblPlantsGene:TraesCS7B01G444300 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:708912542..708913825
Molecular Weight (calculated)
48626.2 Da
IEP (calculated)
7.641
GRAVY (calculated)
-0.001
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLTGIKIQE MVRNTRERLE ADFSKLGTKI HRFPRGLRGV NERYIVPSFV SLGPYHHGSP HLRETEELKH AAAHYLCEKS GRSVEEVYGK ILSIGTEARS
101: CYADGAVAKF TDAEFAVMMF LDGCYLLHYM DMDYQYALLY NRMTLSTGPC MLRDMFLLEN QLPWLILEAL TDFFMPYPAY YIVIGLAKNF DITPQYLSDS
201: DSNGARVSVD ELKIYRPPHL LGLLRYHLIG DMTGKDHTHS LTCSSLASSA TELAEIGIKL TANSKTWFAD MSMQRDPILC GQLSLAPLFI NDANACWLVN
301: MAAYEACVSS TTPADGFVIS SYISILAMLV DKKEDVHELR TKHLVNSFFS THELLVFFKD LARHMRLGYR YFVITEKIEM FKRERPVRIA VHRFVYNNFK
401: TIITVLSVAG VLAGIFRTLM SLKQHQP
101: CYADGAVAKF TDAEFAVMMF LDGCYLLHYM DMDYQYALLY NRMTLSTGPC MLRDMFLLEN QLPWLILEAL TDFFMPYPAY YIVIGLAKNF DITPQYLSDS
201: DSNGARVSVD ELKIYRPPHL LGLLRYHLIG DMTGKDHTHS LTCSSLASSA TELAEIGIKL TANSKTWFAD MSMQRDPILC GQLSLAPLFI NDANACWLVN
301: MAAYEACVSS TTPADGFVIS SYISILAMLV DKKEDVHELR TKHLVNSFFS THELLVFFKD LARHMRLGYR YFVITEKIEM FKRERPVRIA VHRFVYNNFK
401: TIITVLSVAG VLAGIFRTLM SLKQHQP
001: MATPSKRRPP PPPPPPPRLL VLPPLPPPPP PPPPQLPFGP KLPFPHIIIR RKARRNYQLR PMLTWYFLTF MMRQKLQTRN QQPEETREEW VIWIKDKMEQ
101: VMRDAATTSW DKICIYRVPL SLKKSDKNSY FPQAVSLGPY HHGDEHLRPM DYHKWRAVNM VMKRTKQGIE MYIDAMKELE ERARACYEGP IGLSSNKFTQ
201: MLVLDGCFVL DLFRGAYEGF SKLGYDRNDP VFAMRGSMHS IRRDMLMLEN QLPLFVLNRL LELQLGTQYQ TGLVAQLAVR FFNPLMPTYM SSTKIENSQE
301: NNNKFFNPIA DKEKEELHCL DVFRRSLLQP SLKPDPRLSR SRWSRKPLVA DKRQQQLLHC VTELREAGIK FKRRKSDRFW DIQFKNGCLE IPKLLIHDGT
401: KSLFSNLIAY EQCHIDSTND ITSYIIFMDN LIDSAEDIRY LHYYDIIEHW LGNDSEVADV FNRLCQEVAF DLENTYLSEL SNKVDRYYNR KWNVLKATLK
501: HKYFSNPWAY FSFFAAVILL LLTLFQSFFT SYPYFKPPS
101: VMRDAATTSW DKICIYRVPL SLKKSDKNSY FPQAVSLGPY HHGDEHLRPM DYHKWRAVNM VMKRTKQGIE MYIDAMKELE ERARACYEGP IGLSSNKFTQ
201: MLVLDGCFVL DLFRGAYEGF SKLGYDRNDP VFAMRGSMHS IRRDMLMLEN QLPLFVLNRL LELQLGTQYQ TGLVAQLAVR FFNPLMPTYM SSTKIENSQE
301: NNNKFFNPIA DKEKEELHCL DVFRRSLLQP SLKPDPRLSR SRWSRKPLVA DKRQQQLLHC VTELREAGIK FKRRKSDRFW DIQFKNGCLE IPKLLIHDGT
401: KSLFSNLIAY EQCHIDSTND ITSYIIFMDN LIDSAEDIRY LHYYDIIEHW LGNDSEVADV FNRLCQEVAF DLENTYLSEL SNKVDRYYNR KWNVLKATLK
501: HKYFSNPWAY FSFFAAVILL LLTLFQSFFT SYPYFKPPS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:F4IZB4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.