Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G424600.1 | Wheat | cytosol | 96.96 | 96.96 |
| HORVU2Hr1G099720.1 | Barley | cytosol | 84.62 | 84.27 |
| TraesCS2A01G426400.1 | Wheat | cytosol | 80.77 | 80.28 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 56.07 | 53.89 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 50.2 | 48.63 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 50.4 | 48.07 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 23.08 | 37.13 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 38.06 | 36.86 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 28.54 | 34.99 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 35.83 | 34.98 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 35.63 | 34.65 |
| Os11t0278300-00 | Rice | cytosol | 30.97 | 34.15 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 28.95 | 33.49 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 28.95 | 31.64 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 27.33 | 31.54 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 31.98 | 31.41 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 28.74 | 27.57 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 33.0 | 27.03 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 26.92 | 24.14 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G446800.1 | EnsemblPlantsGene:TraesCS2B01G446800 | InterPro:DUF247_pln | ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 |
| PFAM:PF03140 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:639518109..639519763
Molecular Weight (calculated)
55353.3 Da
IEP (calculated)
5.245
GRAVY (calculated)
-0.237
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPCDYQLA VADYWDGRPA MEPTVWVPGL PLQMTVAAPS NSDLVVSSSG RQQLKLVDEY DQYAVQVFER AAESLKERVE EMETKMHLFP PSMGDLADHY
101: AAPKVVSIGP YHHGRTTALQ EMESVKHAAA CHFVKATGRP IQEVYWAVCT VAEEARAHYD AGKLRGLGDD DFKPMMFLDG CFLLQYMQFW CRESGGDEDP
201: DMDPSLYNAF SSIDRPILSD VVLLENQLPW VVIDALLSFL PPPGLDMETL IGRVKQTLQT RQVRYFDAPT LDYKPPHLLG LLRHHIVGSN DTKKSEPELS
301: ERAKELSVSV SAMELAEIGI EITATKATRE GAELRNMGVR RSAYLTGELF LAPLSLNDAN ATFLVNMAAL EQCTTPDFFG EDEEKSAVCS YLCLLGMVTD
401: SEEDVQQLRK KGILQGGAGL SNRDALDLLN KLENRLRPGT HYLSTMILIQ NYKTDRWKRI QFHKFHYNHR KAIFLTFSGI AGFASFLGTL KSLK
101: AAPKVVSIGP YHHGRTTALQ EMESVKHAAA CHFVKATGRP IQEVYWAVCT VAEEARAHYD AGKLRGLGDD DFKPMMFLDG CFLLQYMQFW CRESGGDEDP
201: DMDPSLYNAF SSIDRPILSD VVLLENQLPW VVIDALLSFL PPPGLDMETL IGRVKQTLQT RQVRYFDAPT LDYKPPHLLG LLRHHIVGSN DTKKSEPELS
301: ERAKELSVSV SAMELAEIGI EITATKATRE GAELRNMGVR RSAYLTGELF LAPLSLNDAN ATFLVNMAAL EQCTTPDFFG EDEEKSAVCS YLCLLGMVTD
401: SEEDVQQLRK KGILQGGAGL SNRDALDLLN KLENRLRPGT HYLSTMILIQ NYKTDRWKRI QFHKFHYNHR KAIFLTFSGI AGFASFLGTL KSLK
001: METFGTIPPP PPLPPRLELR RQRAPPPQPP PPPPPPPPPP PPRLGPRLRL RLLPPPRQQL LRLRKQQPLV LPEPLPLRPR AIPWLTGHDV KKGKSYDKLR
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SNE9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.