Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G026800.1 | Wheat | cytosol | 44.63 | 38.43 |
| HORVU1Hr1G091250.1 | Barley | nucleus | 41.59 | 34.97 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 31.54 | 33.5 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 34.11 | 32.3 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 31.54 | 31.62 |
| Os11t0278300-00 | Rice | cytosol | 32.71 | 31.25 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 36.92 | 31.1 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 35.98 | 30.43 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 20.79 | 28.99 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 34.35 | 28.82 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 33.88 | 27.99 |
| TraesCS2B01G446800.1 | Wheat | cytosol | 31.54 | 27.33 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 31.54 | 26.84 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 37.38 | 26.53 |
| TraesCS2B01G447000.1 | Wheat | cytosol, nucleus, peroxisome | 31.78 | 26.46 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 31.78 | 26.41 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 32.71 | 25.41 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 29.21 | 24.51 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G601000.1 | EnsemblPlantsGene:TraesCS2B01G601000 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:784206609..784207895
Molecular Weight (calculated)
48490.7 Da
IEP (calculated)
7.146
GRAVY (calculated)
-0.242
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTETSWECS DLSDAINIIG RERRPAPLAR RDVIEDSGSD SDSDSDSDSD NLDMMEMGRR RTMDAKTWRK TAREFESDFA RVDFRIHRFP TSLRDLGSRY
101: IVPKVVAIGP YHRGSEHLKE MEKVKHVAAY HYILDCQANL KDGFSYEAMK AGVLSVIDDA RGFYADVTAT AAIGDAEFAD MLFLDGCFLL QYMRMLYNRR
201: LLYSSLLCCF DSNQVCISND IMLLENQLPW MVLQALMKFL DTEKTVMKGV ARMGRTLQLR WGESNNRRCK LRSYVPPHLL GLLRFYKTGC KTIEPGQSIF
301: DEAIRRPVSK TVSAAELAEM GITITTSKTR ELGDMGIRKR PLFSQIFVAP LLLDEMRSCW LVNMAAFEVC IATDFLSSTE MPVVCSYLAV LAMLMDREED
401: VHRLRSKHVV QGELTNXXXX ESRNRRKY
101: IVPKVVAIGP YHRGSEHLKE MEKVKHVAAY HYILDCQANL KDGFSYEAMK AGVLSVIDDA RGFYADVTAT AAIGDAEFAD MLFLDGCFLL QYMRMLYNRR
201: LLYSSLLCCF DSNQVCISND IMLLENQLPW MVLQALMKFL DTEKTVMKGV ARMGRTLQLR WGESNNRRCK LRSYVPPHLL GLLRFYKTGC KTIEPGQSIF
301: DEAIRRPVSK TVSAAELAEM GITITTSKTR ELGDMGIRKR PLFSQIFVAP LLLDEMRSCW LVNMAAFEVC IATDFLSSTE MPVVCSYLAV LAMLMDREED
401: VHRLRSKHVV QGELTNXXXX ESRNRRKY
001: MVDAAEQPPS TSEGESLLKI HIERMHKKLK EPPRLLSSAA GKPTCSIFRV PQSMIDCNGR CYEPRVVSIG PYHRGQTQLK MIEEHKWRYL NVLLTRTQNL
101: TLEDYMKSVK NVEEVARECY SETIHMDSEE FNEMMVLDGC FLLELFRKVN NLVPFEPNDP LVAMAWVLPF FYRDFLCLEN QIPFFVLETL FNLTRGDNEN
201: ETNASLQSLA FAFFNNMMHR TEEDLARFKE LRAKHLLDLL RSSFIPESEL HTPPATNPGK EKMPSHIIHS ISKLRRAGIK LRELKDAESF LVVRFRHGTI
301: EMPAITVDDF MSSFLENCVA YEQCHVACSM HFTTYATLLD CLTNTYKDVE YLCDQNIIEN YFGTDTELAK FVNSLGRDVA FDITQCYLKD LFEEVNEYYK
401: SSWHVEWATF KFTYFNSPWS FVSALAALVL LVLSVIQTIY TVFQAYQK
101: TLEDYMKSVK NVEEVARECY SETIHMDSEE FNEMMVLDGC FLLELFRKVN NLVPFEPNDP LVAMAWVLPF FYRDFLCLEN QIPFFVLETL FNLTRGDNEN
201: ETNASLQSLA FAFFNNMMHR TEEDLARFKE LRAKHLLDLL RSSFIPESEL HTPPATNPGK EKMPSHIIHS ISKLRRAGIK LRELKDAESF LVVRFRHGTI
301: EMPAITVDDF MSSFLENCVA YEQCHVACSM HFTTYATLLD CLTNTYKDVE YLCDQNIIEN YFGTDTELAK FVNSLGRDVA FDITQCYLKD LFEEVNEYYK
401: SSWHVEWATF KFTYFNSPWS FVSALAALVL LVLSVIQTIY TVFQAYQK
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SJR2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.