Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G446800.1 | Wheat | cytosol | 53.89 | 56.07 |
| TraesCS2B01G438000.1 | Wheat | cytosol | 49.22 | 48.84 |
| TraesCS2B01G446700.1 | Wheat | cytosol | 48.44 | 48.82 |
| TraesCS1B01G410200.1 | Wheat | cytosol, golgi, peroxisome | 38.52 | 39.13 |
| TraesCS1B01G410000.1 | Wheat | cytosol | 37.94 | 38.24 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 28.6 | 36.48 |
| TraesCS1B01G409900.1 | Wheat | cytosol | 35.21 | 35.63 |
| TraesCS7B01G214600.1 | Wheat | extracellular | 20.82 | 34.85 |
| TraesCS7B01G444300.1 | Wheat | cytosol | 27.82 | 33.49 |
| Os11t0278300-00 | Rice | cytosol | 29.18 | 33.48 |
| TraesCS2B01G601000.1 | Wheat | cytosol | 26.46 | 31.78 |
| TraesCS1B01G021700.1 | Wheat | cytosol | 30.93 | 31.61 |
| TraesCS6B01G062800.1 | Wheat | cytosol | 27.63 | 31.42 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 34.05 | 29.02 |
| TraesCS6B01G397600.1 | Wheat | cytosol | 27.63 | 27.57 |
| TraesCS6B01G062700.1 | Wheat | cytosol | 27.82 | 25.95 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G447000.1 | EnsemblPlantsGene:TraesCS2B01G447000 | InterPro:DUF247_pln | ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 |
| PFAM:PF03140 | SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr2B:-:639996677..640000605
Molecular Weight (calculated)
57299.9 Da
IEP (calculated)
6.243
GRAVY (calculated)
-0.164
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAPPYEYQL AVADYWEGRP AMDPNVWVPG VPLEMTVAPP ASHSGLVDGS PGRQQLKLVE EESIDHHYAV EVFKQAAQSL QGERDKMETK IHLFPPSMGD
101: LAAKYAFPKV VAIGPYHHGR TPALRLMEST KHVAAWHFIN DSGRLVEEVY GAVCAVAEEA RSHYDVDKVR DFGDDDFNPM MFYDGCFLLQ FLLHWVDEAV
201: DPLLKDAFSS NCTSISYDIA LLENQLPWVV VQELMRFMPT PPDLVLVRFT TGWKASMQPT VPLVDNSPLA WDDSYTPLHL LELLRYYIVG STTKTPPQPE
301: VHKKAEKISI SVSAIELAEI GIEITATKPT ADFKEMGVKK KKSLLTGELF LLAPPPRSAA SSSTSSSLTK LSYNANASFL VNMAVLELCT TPDFSVEVEE
401: KSAVCSYLCL LGMVTDNEED VQQLRKKGIL QGGAGLSNKD ALELLSRVEN RLRSGTHYLR TMVLIENYRK ERPRRIKFHK FHYNYRKAII LTLSGVAGLA
501: SFLGALKSLN SSKS
101: LAAKYAFPKV VAIGPYHHGR TPALRLMEST KHVAAWHFIN DSGRLVEEVY GAVCAVAEEA RSHYDVDKVR DFGDDDFNPM MFYDGCFLLQ FLLHWVDEAV
201: DPLLKDAFSS NCTSISYDIA LLENQLPWVV VQELMRFMPT PPDLVLVRFT TGWKASMQPT VPLVDNSPLA WDDSYTPLHL LELLRYYIVG STTKTPPQPE
301: VHKKAEKISI SVSAIELAEI GIEITATKPT ADFKEMGVKK KKSLLTGELF LLAPPPRSAA SSSTSSSLTK LSYNANASFL VNMAVLELCT TPDFSVEVEE
401: KSAVCSYLCL LGMVTDNEED VQQLRKKGIL QGGAGLSNKD ALELLSRVEN RLRSGTHYLR TMVLIENYRK ERPRRIKFHK FHYNYRKAII LTLSGVAGLA
501: SFLGALKSLN SSKS
001: METFGTIPPP PPLPPRLELR RQRAPPPQPP PPPPPPPPPP PPRLGPRLRL RLLPPPRQQL LRLRKQQPLV LPEPLPLRPR AIPWLTGHDV KKGKSYDKLR
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SNE9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.