Factsheet for TraesCS3B01G072300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G072600.1	Wheat	cytosol, endoplasmic reticulum, nucleus	56.82	56.4
TraesCS4A01G370900.1	Wheat	cytosol	56.33	56.05
HORVU3Hr1G011300.1	Barley	cytosol	54.59	50.11
HORVU3Hr1G011030.1	Barley	cytosol	53.1	49.08
TraesCS6B01G062800.1	Wheat	cytosol	37.97	33.85
Os11t0278300-00	Rice	cytosol	36.23	32.59
TraesCS2B01G601000.1	Wheat	cytosol	33.5	31.54
TraesCS7B01G444300.1	Wheat	cytosol	33.25	31.38
TraesCS1B01G410200.1	Wheat	cytosol, golgi, peroxisome	37.47	29.84
TraesCS7B01G214600.1	Wheat	extracellular	22.58	29.64
TraesCS2B01G447000.1	Wheat	cytosol, nucleus, peroxisome	36.48	28.6
TraesCS2B01G446800.1	Wheat	cytosol	34.99	28.54
TraesCS1B01G410000.1	Wheat	cytosol	35.73	28.24
TraesCS6B01G466100.1	Wheat	cytosol	42.18	28.19
TraesCS1B01G409900.1	Wheat	cytosol	35.24	27.95
TraesCS6B01G062700.1	Wheat	cytosol	37.22	27.22
TraesCS2B01G438000.1	Wheat	cytosol	34.99	27.22
TraesCS1B01G021700.1	Wheat	cytosol	33.25	26.64
TraesCS2B01G446700.1	Wheat	cytosol	33.5	26.47
TraesCS6B01G397600.1	Wheat	cytosol	33.75	26.41

Protein Annotations

EnsemblPlants:TraesCS3B01G072300.1	EnsemblPlantsGene:TraesCS3B01G072300	InterPro:DUF247_pln	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140
TMHMM:TMhelix	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:43679518..43680828

Molecular Weight (calculated)

45403.5 Da

IEP (calculated)

5.822

GRAVY (calculated)

0.048

Length

403 amino acids

Sequence
(BLAST)

001: MAIEDHPPEP TRIPAEEWKQ TANEFTSCVW ESKFHRFPAS LRDLGERYIE PMVVAIGPYH HGIPKLEEME KLKMVAAHCF IEDSGHSPEE IYGAVSAVAG
101: MARGLYVGDE VADPSLQRAL ICNRVCIEND IMLLENQIPW SVVDILNGLS GAPAPVDKFI SIMGSMFQIG QRGSVGIGSF LTLLSTGCNP PHLLALFRME
201: KVGPVHRSYV ELPSTLPFTI RATDLARMSI RIKPCMTPYF CDMGIWIAKI FSYLFLPPLF LDETRACWLV NMAALEVCTA SNDREDIRKL HTAVCSYLAL
301: LAMLMNREED VEELHKKQIL QANLTDKETL DFFKNLVKRL DGGPVYNSIV AEIQQYKETT SWIKVYGFIQ DNTKIILTML PIIGFLAGIL RTLLSLNSRQ
401: QYN

Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)

001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK

Arabidopsis Description

At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.