Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G072600.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 96.05 | 95.81 |
| HORVU3Hr1G011030.1 | Barley | cytosol | 69.14 | 64.22 |
| HORVU3Hr1G011300.1 | Barley | cytosol | 63.7 | 58.77 |
| TraesCS3B01G072300.1 | Wheat | cytosol | 56.05 | 56.33 |
| TraesCS7A01G527400.1 | Wheat | cytosol | 14.07 | 44.88 |
| TraesCS7A01G527300.1 | Wheat | plasma membrane | 29.14 | 40.69 |
| TraesCS4A01G026800.1 | Wheat | cytosol | 46.42 | 37.83 |
| Os11t0278300-00 | Rice | cytosol | 40.25 | 36.38 |
| TraesCS7A01G527500.1 | Wheat | cytosol | 39.01 | 35.67 |
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 45.19 | 35.6 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 38.77 | 32.85 |
| TraesCS2A01G426400.1 | Wheat | cytosol | 36.79 | 29.98 |
| TraesCS2A01G419300.1 | Wheat | cytosol | 35.31 | 29.79 |
| TraesCS1A01G017500.1 | Wheat | cytosol | 36.05 | 28.68 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 34.07 | 27.77 |
| TraesCS3A01G497000.1 | Wheat | cytosol | 29.38 | 26.68 |
| TraesCS1A01G017600.1 | Wheat | cytosol | 35.06 | 26.05 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G370900.1 | EnsemblPlantsGene:TraesCS4A01G370900 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:642828515..642829993
Molecular Weight (calculated)
45920.8 Da
IEP (calculated)
7.556
GRAVY (calculated)
-0.102
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWTFHRFPA SLRELDSRYV KPLVVALGPY HHGDTKLQEM ENLKRVAAER FVHASGSELD LEEIFQAVSA VAGTARGLYI GDEVAGMSAD EFATMMLYDA
101: CFLLQYIRVM DSDPRDPADA SVERLFVSNR VCIENDIMLL ENQLPWSVVQ ALNSLGRSPA PVDKFISTMG STFKIRGHRE SAQPFRPYTS DRNPPHLLAL
201: FRLEKVGYTR TQGVPPSSSM AITASATELA EMAINIQPCM TSDFMDMGIW IEKLFSHLYL APLFLDETRA CWLVNMAALE VCTASNDRDD DIMKRETAVC
301: SYLALLAMLM NREEDVHELR NKQVVQAKLT DKETLDFFKS VVKRLDGGRL YSGIMAEIDN YKGRRRRRIK VYRFIKKNKR SIIAVLSIIA VLVGIFKTLL
401: SLKTH
101: CFLLQYIRVM DSDPRDPADA SVERLFVSNR VCIENDIMLL ENQLPWSVVQ ALNSLGRSPA PVDKFISTMG STFKIRGHRE SAQPFRPYTS DRNPPHLLAL
201: FRLEKVGYTR TQGVPPSSSM AITASATELA EMAINIQPCM TSDFMDMGIW IEKLFSHLYL APLFLDETRA CWLVNMAALE VCTASNDRDD DIMKRETAVC
301: SYLALLAMLM NREEDVHELR NKQVVQAKLT DKETLDFFKS VVKRLDGGRL YSGIMAEIDN YKGRRRRRIK VYRFIKKNKR SIIAVLSIIA VLVGIFKTLL
401: SLKTH
001: MVSVLDGRSV SSNKKNRRFS RIVRTYYGII RRARQRQKLR NDKETYGELE NIEVIEEKPR ETQVESVVSI EDKNEQKLRE IWVISLNDKM KTLGDNATTS
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
101: WDNLCIYRVP PYLQENDTKS YMPQIVSIGP YHHGHKHLMP MERHKWRAVN MVMARAKHDI EMYIDAMKEL EEKARACYQG PINMNRNEFI EMLVLDGVFI
201: IEIFKGTSEG FQEIGYAPND PVFGMRGLMQ SIRRDMVMLE NQLPWSVLKG LLQLQRPDVL DKVNVQLFQP FFQPLLPTRE VLTEEGGLHC LDVLRRGLLQ
301: SSGTSDEDMS MVNKQPQQLI HCVTELRNAG VEFMRKETGH FWDIEFKNGY LKIPKLLIHD GTKSLFLNLI AFEQCHIKSS KKITSYIIFM DNLINSSEDV
401: SYLHHYGIIE NWLGSDSEVS DLFNGLGKEV IFDPNDGYLS ALTGEVNIYY RRKWNYLKAT LRHKYFNNPW AYFSFIAAVT LLIFTFCQSF FAVFAYFKPP
501: PKT
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q45GK4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.