Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G021700.1 | Wheat | cytosol | 51.19 | 55.47 |
| HORVU1Hr1G001700.1 | Barley | cytosol, nucleus | 44.04 | 52.4 |
| TraesCS1A01G017500.1 | Wheat | cytosol | 45.69 | 48.92 |
| HORVU1Hr1G001580.1 | Barley | nucleus | 46.05 | 48.27 |
| HORVU1Hr1G001600.1 | Barley | cytosol | 25.14 | 47.4 |
| TraesCS7A01G072600.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 26.79 | 35.96 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 31.38 | 35.77 |
| TraesCS4A01G370900.1 | Wheat | cytosol | 26.05 | 35.06 |
| Os11t0278300-00 | Rice | cytosol | 25.32 | 30.8 |
| TraesCS4A01G026800.1 | Wheat | cytosol | 28.07 | 30.78 |
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 28.99 | 30.74 |
| TraesCS7A01G527300.1 | Wheat | plasma membrane | 16.33 | 30.69 |
| TraesCS2A01G419300.1 | Wheat | cytosol | 26.79 | 30.42 |
| TraesCS2A01G426400.1 | Wheat | cytosol | 27.16 | 29.78 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 26.61 | 29.18 |
| TraesCS7A01G527400.1 | Wheat | cytosol | 6.79 | 29.13 |
| TraesCS7A01G527500.1 | Wheat | cytosol | 23.12 | 28.44 |
| TraesCS3A01G497000.1 | Wheat | cytosol | 18.53 | 22.65 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G017600.1 | EnsemblPlantsGene:TraesCS1A01G017600 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:9220029..9221666
Molecular Weight (calculated)
61530.1 Da
IEP (calculated)
5.809
GRAVY (calculated)
-0.323
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMEPSWVVT CDSGWSMEEA AAAWSSEHRI SFQTSLPSHS DSHSGVQQQV VEYASPSPSP VPATHDNNRS YPIQVFKEAV EEFNANYSKI MAQKMHRFPP
101: SLVDVDIRYR EPVTVAIGPI HHARLSYVEG GLSEAESVKH VAADQCIAHS SRSLEEMYTK VSSVSGLARR LYHPSDVVKF GHRDDFVPMM FFDACFLVQF
201: MRWHYLPDKG MHHALNSYFY ANRERIRTDI MMLENQIPWV VVKTILDFMP PAPLDWSCPW EAFVKAMRRG LKNKIGRDDN IDVLPGHHPP HVLGLVWHYI
301: VGNKNQDPLP PNDDDDEDPI PPNDDDDDED PIPPNDNNND NDNDNNNDNT NNKPMAISIT VDELADIGIT LLPKENAGLV EMQIEKRTWC FFKVAKLFVG
401: PLYLTEANAT WLVNMAAFES CKTPNFLHPS VLPSESAVCS YLHLFAMLLD RKEHVHNLQK KKVIEGGGLT SKEALDFFTS IGKNMRIGSF YVDIIVDIHY
501: YDLQKSDLAR FIHYLGRNKT KLAGLLSIIA AVAGILSSLQ ALKPS
101: SLVDVDIRYR EPVTVAIGPI HHARLSYVEG GLSEAESVKH VAADQCIAHS SRSLEEMYTK VSSVSGLARR LYHPSDVVKF GHRDDFVPMM FFDACFLVQF
201: MRWHYLPDKG MHHALNSYFY ANRERIRTDI MMLENQIPWV VVKTILDFMP PAPLDWSCPW EAFVKAMRRG LKNKIGRDDN IDVLPGHHPP HVLGLVWHYI
301: VGNKNQDPLP PNDDDDEDPI PPNDDDDDED PIPPNDNNND NDNDNNNDNT NNKPMAISIT VDELADIGIT LLPKENAGLV EMQIEKRTWC FFKVAKLFVG
401: PLYLTEANAT WLVNMAAFES CKTPNFLHPS VLPSESAVCS YLHLFAMLLD RKEHVHNLQK KKVIEGGGLT SKEALDFFTS IGKNMRIGSF YVDIIVDIHY
501: YDLQKSDLAR FIHYLGRNKT KLAGLLSIIA AVAGILSSLQ ALKPS
001: MVLFSDGRST STHKRYRRLS WFVPIHSFHE ITRRDLGQNL HNHVETYVEP SKIEVKEEKP RETREEWVIS IKDKMEKALS YDATNSWDKL CIYRVPFYLQ
101: ENDKKSYLPQ TVSIGPYHHG KVHLRPMERH KWRAVNMIMA RTKHNIEMYI DAMKELEEEA RACYQGPIDM KNSNEFTEML VLDGCFVLEL FKGTIQGFQK
201: IGYARNDPVF AKRGLMHSIQ RDMIMLENQL PLFVLDRLLG LQTGTPNQTG IVAEVAVRFF KTLMPTSEVL TKSERSLDSQ EKSDELGDNG GLHCLDVFHR
301: SLIQSSETTN QGTPYEDMSM VEKQQQLIHC VTELRGAGVN FMRKETGQLW DIEFKNGYLK IPKLLIHDGT KSLFSNLIAF EQCHTQSSNN ITSYIIFMDN
401: LINSSQDVSY LHHDGIIEHW LGSDSEVADL FNRLCKEVIF DPKDGYLSQL SREVNRYYSR KWNSLKATLR QKYFNNPWAY FSFSAAVILL FLTFFQSFFA
501: VYAYYKPLS
101: ENDKKSYLPQ TVSIGPYHHG KVHLRPMERH KWRAVNMIMA RTKHNIEMYI DAMKELEEEA RACYQGPIDM KNSNEFTEML VLDGCFVLEL FKGTIQGFQK
201: IGYARNDPVF AKRGLMHSIQ RDMIMLENQL PLFVLDRLLG LQTGTPNQTG IVAEVAVRFF KTLMPTSEVL TKSERSLDSQ EKSDELGDNG GLHCLDVFHR
301: SLIQSSETTN QGTPYEDMSM VEKQQQLIHC VTELRGAGVN FMRKETGQLW DIEFKNGYLK IPKLLIHDGT KSLFSNLIAF EQCHTQSSNN ITSYIIFMDN
401: LINSSQDVSY LHHDGIIEHW LGSDSEVADL FNRLCKEVIF DPKDGYLSQL SREVNRYYSR KWNSLKATLR QKYFNNPWAY FSFSAAVILL FLTFFQSFFA
501: VYAYYKPLS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SN03]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.