Factsheet for HORVU1Hr1G001600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G001700.1	Barley	cytosol, nucleus	50.87	32.1
TraesCS1B01G021700.1	Wheat	cytosol	51.9	29.82
HORVU1Hr1G001580.1	Barley	nucleus	50.52	28.08
HORVU2Hr1G099740.1	Barley	cytosol, peroxisome, plastid, vacuole	25.95	25.86
HORVU1Hr1G001690.1	Barley	cytosol	43.6	25.15
HORVU1Hr1G001610.1	Barley	cytosol	43.6	25.15
TraesCS1A01G017600.1	Wheat	cytosol	47.4	25.14
HORVU6Hr1G094220.1	Barley	cytosol	23.88	22.12
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	29.07	22.11
HORVU4Hr1G066650.2	Barley	cytosol	20.42	20.7
HORVU3Hr1G011030.1	Barley	cytosol	30.45	20.18
HORVU1Hr1G084670.1	Barley	cytosol	32.87	18.74
HORVU3Hr1G011300.1	Barley	cytosol	28.37	18.68
HORVU2Hr1G099720.1	Barley	cytosol	31.83	18.55
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	26.99	17.07
HORVU1Hr1G091250.1	Barley	nucleus	29.07	16.5
Os11t0278300-00	Rice	cytosol	25.26	16.29
HORVU0Hr1G017830.1	Barley	cytosol	29.76	16.2
HORVU1Hr1G091220.1	Barley	cytosol	23.88	12.87
HORVU1Hr1G055270.1	Barley	cytosol	10.38	8.88
HORVU1Hr1G001680.1	Barley	cytosol	5.54	5.86

Protein Annotations

EnsemblPlants:HORVU1Hr1G001600.1	EnsemblPlantsGene:HORVU1Hr1G001600	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B464CEB
UniProt:A0A287EFN3	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:3729711..3731382

Molecular Weight (calculated)

32742.1 Da

IEP (calculated)

4.595

GRAVY (calculated)

-0.409

Length

289 amino acids

Sequence
(BLAST)

001: MTMRWGLKNQ VGPDDDINVH TDYVPPHVLG LIRYYIVRND DDDDDDDDDN DDDKDPHSQS NDDDEDNEDP RPPNNDDDEN DDNKMPQPPS NEKEDHMSLS
101: ISVAELEDIG ITLVPARKER EAGLVRMRLV KKRPCFFDIG ELIVRPLFLT EANATWLVNM AAFELCKTPD FQAHGVPARD SAVCSYLHLF AMLLDREQHV
201: HELQKINVIE GGGLTSKEAL KFFTSIGKNM RLGTSYIDII IMINIFKQER SPLIKFILFL KKKKAKVMAL ISIIAAVVGI LSSLQALKP

Best Arabidopsis Sequence Match ( AT5G22540.1 )
(BLAST)

001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK

Arabidopsis Description

At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.