Factsheet for HORVU6Hr1G094220.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plasma membrane 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G512000.1	Wheat	cytosol	53.21	44.5
HORVU4Hr1G066650.2	Barley	cytosol	34.29	37.54
HORVU0Hr1G017830.1	Barley	cytosol	63.78	37.48
HORVU2Hr1G099740.1	Barley	cytosol, peroxisome, plastid, vacuole	32.05	34.48
TraesCS7A01G496100.1	Wheat	cytosol, nucleus, plasma membrane	56.41	34.24
TraesCS6B01G466100.1	Wheat	cytosol	57.05	29.52
TraesCS6D01G400600.1	Wheat	cytosol	52.24	28.01
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	33.97	27.89
Os11t0278300-00	Rice	cytosol	39.1	27.23
HORVU3Hr1G011300.1	Barley	cytosol	36.54	25.97
HORVU3Hr1G011030.1	Barley	cytosol	35.26	25.23
HORVU1Hr1G091250.1	Barley	nucleus	40.71	24.95
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	35.9	24.51
HORVU1Hr1G001600.1	Barley	cytosol	22.12	23.88
HORVU1Hr1G084670.1	Barley	cytosol	36.86	22.68
HORVU2Hr1G099720.1	Barley	cytosol	33.33	20.97
HORVU1Hr1G091220.1	Barley	cytosol	35.26	20.52
HORVU1Hr1G001700.1	Barley	cytosol, nucleus	28.53	19.43
HORVU1Hr1G001690.1	Barley	cytosol	29.17	18.16
HORVU1Hr1G001610.1	Barley	cytosol	29.17	18.16
HORVU1Hr1G001580.1	Barley	nucleus	28.21	16.92
HORVU1Hr1G055270.1	Barley	cytosol	9.62	8.88
HORVU1Hr1G001680.1	Barley	cytosol	6.73	7.69

Protein Annotations

EnsemblPlants:HORVU6Hr1G094220.1	EnsemblPlantsGene:HORVU6Hr1G094220	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B46B542
UniProt:A0A287V937	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:580807622..580809272

Molecular Weight (calculated)

35267.5 Da

IEP (calculated)

9.753

GRAVY (calculated)

0.053

Length

312 amino acids

Sequence
(BLAST)

001: MLLENQLPWL VVETLVNFRS ASVFMSVKET VSRVGDALTN RIYHTGPEEI LSNLDQERYC KPPHLLELLR FYKTNSNTNT AIKVSKKAKI TSKIACINQA
101: FSMFGRLKAG MIAEPNLGHI PSAKKQAMST STAMELAEIG IKLKAIKTGR FAEISIRKGP LFGELSLTPL VLSSTSACWL VNMAAFEVCM ASGDQRDVEE
201: MAVCSYIALI SMLMDREEDV HELRTKHIVQ GEFTNKEMLE FFKSLTKHLS VGNSYVRILT HIEHYKVKRW MWVKVHKFVY NNFKAIVTVL TVVGVLVGIF
301: KTLLSLKQHH DV

Best Arabidopsis Sequence Match ( AT3G47200.1 )
(BLAST)

001: MADKTDIISS SSDKASPPPP SAFRNYLSSG SKEPVLLLES AGKESCCIFR VPESFVALNP KAYKPKVVSI GPYHYGEKHL QMIQQHKPRL LQLFLDEAKK
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP

Arabidopsis Description

UPF0481 protein At3g47200 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD53]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.