Factsheet for HORVU1Hr1G091220.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G424200.1	Wheat	plasma membrane	46.64	52.41
HORVU3Hr1G011030.1	Barley	cytosol	28.92	35.55
HORVU6Hr1G094220.1	Barley	cytosol	20.52	35.26
HORVU3Hr1G011300.1	Barley	cytosol	28.36	34.62
Os11t0278300-00	Rice	cytosol	27.24	32.59
TraesCS6B01G062800.1	Wheat	cytosol	27.43	32.52
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	26.31	30.85
HORVU1Hr1G091250.1	Barley	nucleus	29.29	30.84
HORVU4Hr1G066650.2	Barley	cytosol	16.23	30.53
HORVU0Hr1G017830.1	Barley	cytosol	29.66	29.94
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	20.9	29.47
HORVU2Hr1G099740.1	Barley	cytosol, peroxisome, plastid, vacuole	15.3	28.28
HORVU1Hr1G084670.1	Barley	cytosol	25.37	26.82
TraesCS6B01G062700.1	Wheat	cytosol	26.68	25.95
HORVU2Hr1G099720.1	Barley	cytosol	23.88	25.81
HORVU1Hr1G001680.1	Barley	cytosol	13.06	25.64
HORVU1Hr1G001700.1	Barley	cytosol, nucleus	21.08	24.67
HORVU1Hr1G001690.1	Barley	cytosol	22.95	24.55
HORVU1Hr1G001610.1	Barley	cytosol	22.95	24.55
HORVU1Hr1G001600.1	Barley	cytosol	12.87	23.88
HORVU1Hr1G001580.1	Barley	nucleus	21.08	21.73
HORVU1Hr1G055270.1	Barley	cytosol	13.43	21.3

Protein Annotations

EnsemblPlants:HORVU1Hr1G091220.1	EnsemblPlantsGene:HORVU1Hr1G091220	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
ncoils:Coil	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	SEG:seg	TMHMM:TMhelix
UniParc:UPI000B47476A	UniProt:A0A287GQ24	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:547733802..547735924

Molecular Weight (calculated)

58974.1 Da

IEP (calculated)

6.252

GRAVY (calculated)

-0.084

Length

536 amino acids

Sequence
(BLAST)

001: MNQGQAAAVF EGVYARRLDM IHRFPPGLRA LGTRYIEPLF VAIGPYHRHL PRVQEMERMK RVAVHQFMQD TGLDWDALLA AAGVVAAQAR ALYDIPPAQN
101: QGGDDPAAVQ VPEAADQGEP QPHEQGAGQQ EQNQDGVGPA AEQALGAGVQ EVLAAGHHGI PLPPLPMSNA GFQEMLCIDA FFLLHYISMR DADNVPPSAL
201: AHLFYSRRSL IDNDIMLLEN QIPFFVLTHL NELHPIFLRP FVAKLATNFH GHKSTRRIPP FQHHGYTPPH LLALLRFCMK EPVPAPPAPD AAGGPQQAPD
301: AGGGPQQAPD VEDGAQAPAP DAGGGAPPAL DAAGGPQQAP DVSITFTAIG LEEIGINLNV SDRNRFTDMA IRKRSFGPHL FKDPLLLGRE LVLPQLFLGN
401: VSSNYLVNMA AWEVCTAESY VERDTIVCSY IRILAMLMHR EDDVHQLRAV HLMEGELTDR ETLDLITSLG KHLPMGERYV RMLASIEEYK LVTWFWIAVH
501: KLFYLYFKKI ATFFAAIGSL AGVFKAFELV LVKKHQ

Best Arabidopsis Sequence Match ( AT3G47200.1 )
(BLAST)

001: MADKTDIISS SSDKASPPPP SAFRNYLSSG SKEPVLLLES AGKESCCIFR VPESFVALNP KAYKPKVVSI GPYHYGEKHL QMIQQHKPRL LQLFLDEAKK
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP

Arabidopsis Description

UPF0481 protein At3g47200 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD53]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.