Factsheet for HORVU2Hr1G099720.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G446800.1	Wheat	cytosol	84.27	84.62
TraesCS2D01G424600.1	Wheat	cytosol	83.67	84.01
TraesCS2A01G426400.1	Wheat	cytosol	82.26	82.09
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	44.76	58.42
HORVU2Hr1G099740.1	Barley	cytosol, peroxisome, plastid, vacuole	29.44	50.34
HORVU1Hr1G084670.1	Barley	cytosol	39.31	38.46
Os11t0278300-00	Rice	cytosol	32.06	35.49
HORVU3Hr1G011030.1	Barley	cytosol	30.65	34.86
HORVU1Hr1G001700.1	Barley	cytosol, nucleus	31.05	33.62
HORVU4Hr1G066650.2	Barley	cytosol	19.15	33.33
HORVU6Hr1G094220.1	Barley	cytosol	20.97	33.33
HORVU3Hr1G011300.1	Barley	cytosol	29.23	33.03
HORVU0Hr1G017830.1	Barley	cytosol	34.27	32.02
HORVU1Hr1G001600.1	Barley	cytosol	18.55	31.83
HORVU1Hr1G091250.1	Barley	nucleus	32.66	31.83
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	29.03	31.51
HORVU1Hr1G001690.1	Barley	cytosol	30.44	30.14
HORVU1Hr1G001610.1	Barley	cytosol	30.44	30.14
HORVU1Hr1G001680.1	Barley	cytosol	16.33	29.67
HORVU1Hr1G001580.1	Barley	nucleus	31.05	29.62
HORVU1Hr1G055270.1	Barley	cytosol	17.74	26.04
HORVU1Hr1G091220.1	Barley	cytosol	25.81	23.88

Protein Annotations

EnsemblPlants:HORVU2Hr1G099720.1	EnsemblPlantsGene:HORVU2Hr1G099720	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
ncoils:Coil	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	SEG:seg	TMHMM:TMhelix
UniParc:UPI00029675B9	UniProt:M0X9N3	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:688264534..688266608

Molecular Weight (calculated)

55565.8 Da

IEP (calculated)

5.587

GRAVY (calculated)

-0.230

Length

496 amino acids

Sequence
(BLAST)

001: MEAPCEYQLA VAADYWDGRP AMEPTAWVPG LPLQMTVAAP SNSDLVVSSS VRQQLKLVDE YDHYAVQVFE QAAESLKERV DEMEMKMHLF PPSMGDLADH
101: YAAPKVVSIG PYHHGRTPAL QEMESVKHAA ACHFVKATGR PIQEVYWAVC TVAEEARGHY HGGRLRGLGD DDFKPMMFLD GCFLLQYMQF WCRESGGDED
201: PDMDPSLYNA FSSVDRPILS DVVLLENQLP WVVIKALLSF LPGPGLDMET LIGRVKQTLQ TRQVRYFDAP TLDYTPPHLL GLLRHHIVGS NNTKKSEPEL
301: SERAKELSIS VSAMELAEIG IEITATKPTP EGAELRKMGI DRKKSWLTGE LFLAPLSLND ANATFLVNMA ALEQCTTPDF FAQDEEKSAV CSYLCLLGMV
401: TDSEEDVQQL RKKHILQGGA GLSNKDALDL LNKLENRLRP GTHYLSTMIL IENYKTDRWK RIEFHKFHYN YRKAILLTIS GIAGLASFLG TLKSLK

Best Arabidopsis Sequence Match ( AT3G50180.1 )
(BLAST)

001: METFGTIPPP PPLPPRLELR RQRAPPPQPP PPPPPPPPPP PPRLGPRLRL RLLPPPRQQL LRLRKQQPLV LPEPLPLRPR AIPWLTGHDV KKGKSYDKLR
101: EYVENVRRQN EESERVVLPK SISYEDQNLE NQQDTRSKPG INEVVEGSGT KRLEWVISIK DKLEQAYRND DRTSWGKLCI YKVPHYLHGN DKKSYFPQTV
201: SLGPYHHGRQ QTQSMECHKW RAVNMVLKRT NQGIEVFLDA MIELEEKARA CYEGSIVLSS NEFTEMLLLD GCFILELLQG VNEGFLKLGY DHNDPVFAVR
301: GSMHSIQRDM IMLENQLPLF VLNRLLELQP GTQNQTGLVE LVVRFFIPLM PTAETLTENS PPRGVSNGEL HCLDVFHRSL LFPRSSGKAN YSRVADKHLQ
401: RVIPTVTELR DAGFKFKLNK TDRFWDIKFS NGYLEIPGLL IHDGTKSLFL NLIAFEQCHI ESSNDITSYI IFMDNLIDSP EDISYLHHCG IIEHSLGSNS
501: EVADMFNQLC QEVVFDTKDI YLSQLLIEVH RCYKQNYSRK LNSLKTTLIL KYLDNPWAYL SFFAAVILLI LTFSQSYFAA YAYFNPSS

Arabidopsis Description

Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SNE9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.