Factsheet for HORVU1Hr1G001700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus

Predictor Summary:

nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G001580.1	Barley	nucleus	90.61	79.81
HORVU1Hr1G001600.1	Barley	cytosol	32.1	50.87
TraesCS1B01G021700.1	Wheat	cytosol	55.68	50.7
HORVU1Hr1G001680.1	Barley	cytosol	28.6	47.99
HORVU1Hr1G001690.1	Barley	cytosol	49.13	44.91
HORVU1Hr1G001610.1	Barley	cytosol	49.13	44.91
TraesCS1A01G017600.1	Wheat	cytosol	52.4	44.04
HORVU1Hr1G055270.1	Barley	cytosol	28.82	39.05
HORVU2Hr1G099740.1	Barley	cytosol, peroxisome, plastid, vacuole	22.05	34.83
HORVU2Hr1G098560.1	Barley	cytosol, peroxisome	27.29	32.89
HORVU2Hr1G099720.1	Barley	cytosol	33.62	31.05
HORVU1Hr1G084670.1	Barley	cytosol	34.06	30.77
HORVU3Hr1G011030.1	Barley	cytosol	28.38	29.82
Os11t0278300-00	Rice	cytosol	28.17	28.79
HORVU6Hr1G094220.1	Barley	cytosol	19.43	28.53
HORVU3Hr1G011300.1	Barley	cytosol	26.64	27.79
HORVU0Hr1G017830.1	Barley	cytosol	31.88	27.5
HORVU4Hr1G087220.1	Barley	cytosol, peroxisome	26.64	26.7
HORVU4Hr1G066650.2	Barley	cytosol	16.16	25.96
HORVU1Hr1G091250.1	Barley	nucleus	28.82	25.93
HORVU1Hr1G091220.1	Barley	cytosol	24.67	21.08

Protein Annotations

EnsemblPlants:HORVU1Hr1G001700.1	EnsemblPlantsGene:HORVU1Hr1G001700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:DUF247_pln
PANTHER:PTHR31549	PANTHER:PTHR31549:SF32	PFAM:PF03140	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B484CC3
UniProt:A0A287EFU2	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:3794464..3795988

Molecular Weight (calculated)

52822.5 Da

IEP (calculated)

5.411

GRAVY (calculated)

-0.252

Length

458 amino acids

Sequence
(BLAST)

001: HDICSETVQV FEEVTQVFND NYLVIMKDKM HKFPPSLGDV PDWWKVPATV AIGPYYHGEP GLLEAEQVKH SAANQCIRDS PVASLQEMYN AVFAVLPDAL
101: NLYYQDELAK FRHDDLLPMM FIDACFLVQF MRWYYLPEGD MHQALESYFS ANYERICTDI MMLENQIPWV VVKTIFNLMP PAPSPWLSPW ERFVIVMRRG
201: LGNQVGPEDN IDVDPEYHPP HVLGLIWHYI VRNNNHHGDD DDEEDDHNNE DDDNDNDKDD DDKQKPLSIS VAELAAIGIT LVPTRKEWKA GLMSMRLKKK
301: PRCFFVFGDL EVRPLYLSEG NAAWLVNMAA FELCKTPDFQ SDHVHDRDSA VCSYLHLFAM LLDQQQDVHE LQKEHLIEGG GLTSKMTLHF FASIGKNMRP
401: GTFYLRIIMR IEKFRNDRSR LLRCILFLKR KRAKVMALIS IIAAVVGILS SLQALKPH

Best Arabidopsis Sequence Match ( AT3G47200.1 )
(BLAST)

001: MADKTDIISS SSDKASPPPP SAFRNYLSSG SKEPVLLLES AGKESCCIFR VPESFVALNP KAYKPKVVSI GPYHYGEKHL QMIQQHKPRL LQLFLDEAKK
101: KDVEENVLVK AVVDLEDKIR KSYSEELKTG HDLMFMMVLD GCFILMVFLI MSGNIELSED PIFSIPWLLS SIQSDLLLLE NQVPFFVLQT LYVGSKIGVS
201: SDLNRIAFHF FKNPIDKEGS YWEKHRNYKA KHLLDLIRET FLPNTSESDK ASSPHVQVQL HEGKSGNVPS VDSKAVPLIL SAKRLRLQGI KFRLRRSKED
301: SILNVRLKKN KLQIPQLRFD GFISSFFLNC VAFEQFYTDS SNEITTYIVF MGCLLNNEED VTFLRNDKLI IENHFGSNNE VSEFFKTISK DVVFEVDTSY
401: LNNVFKGVNE YTKKWYNGLW AGFRHTHFES PWTFLSSCAV LFVILLTMLQ STVAILSYLN DKKGNGNAAP PPLGLP

Arabidopsis Description

UPF0481 protein At3g47200 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD53]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.