Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G094220.1 | Barley | cytosol | 37.54 | 34.29 |
| HORVU2Hr1G099740.1 | Barley | cytosol, peroxisome, plastid, vacuole | 29.47 | 28.97 |
| HORVU2Hr1G098560.1 | Barley | cytosol, peroxisome | 32.98 | 24.74 |
| HORVU3Hr1G011030.1 | Barley | cytosol | 36.49 | 23.85 |
| HORVU3Hr1G011300.1 | Barley | cytosol | 35.79 | 23.23 |
| HORVU1Hr1G091250.1 | Barley | nucleus | 40.35 | 22.59 |
| Zm00001d052387_P001 | Maize | cytosol, nucleus, plasma membrane | 37.89 | 21.56 |
| HORVU4Hr1G087220.1 | Barley | cytosol, peroxisome | 33.68 | 21.01 |
| HORVU1Hr1G001600.1 | Barley | cytosol | 20.7 | 20.42 |
| Os11t0278300-00 | Rice | cytosol | 30.88 | 19.64 |
| HORVU0Hr1G017830.1 | Barley | cytosol | 36.49 | 19.59 |
| HORVU2Hr1G099720.1 | Barley | cytosol | 33.33 | 19.15 |
| HORVU1Hr1G084670.1 | Barley | cytosol | 32.63 | 18.34 |
| HORVU1Hr1G091220.1 | Barley | cytosol | 30.53 | 16.23 |
| HORVU1Hr1G001700.1 | Barley | cytosol, nucleus | 25.96 | 16.16 |
| HORVU1Hr1G001690.1 | Barley | cytosol | 24.91 | 14.17 |
| HORVU1Hr1G001610.1 | Barley | cytosol | 24.91 | 14.17 |
| HORVU1Hr1G001580.1 | Barley | nucleus | 24.91 | 13.65 |
| HORVU1Hr1G001680.1 | Barley | cytosol | 9.12 | 9.52 |
| HORVU1Hr1G055270.1 | Barley | cytosol | 10.18 | 8.58 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G066650.2 | EnsemblPlantsGene:HORVU4Hr1G066650 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF247_pln |
| PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 | TMHMM:TMhelix | UniParc:UPI000B47498F | UniProt:A0A287PF93 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:554588485..554590478
Molecular Weight (calculated)
32252.4 Da
IEP (calculated)
9.435
GRAVY (calculated)
-0.042
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLENQLPWH VVVAVMDSLQ PEARSNLMES VGNFIVRMGK TFKIRHDGEA EDFVWETNGL PQPHLLRLFR RHKTEPGSRI KWSEVNHISA SSAIELAQMG
101: IKLKASKSAA FTDMDIKRKW TLNGELSLAP LSLNDARARC LVNMAAFELS TAWSYEDHPN STAVCSYLAL FAMFMAKEDD VQVLRSRRIL HGHYTNAEMI
201: AFFNVVMNHL PDRGCRFAHI MAHIVDYKKR RCIPTRVHKF LYLNCGTIVQ VLTIVSILGG LFQLLLSVNK GQAGNNGQYL TLLPS
101: IKLKASKSAA FTDMDIKRKW TLNGELSLAP LSLNDARARC LVNMAAFELS TAWSYEDHPN STAVCSYLAL FAMFMAKEDD VQVLRSRRIL HGHYTNAEMI
201: AFFNVVMNHL PDRGCRFAHI MAHIVDYKKR RCIPTRVHKF LYLNCGTIVQ VLTIVSILGG LFQLLLSVNK GQAGNNGQYL TLLPS
001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
Arabidopsis Description
At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.