Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G512000.1 | Wheat | cytosol | 46.89 | 64.61 |
| HORVU0Hr1G017830.1 | Barley | cytosol | 62.65 | 60.64 |
| TraesCS7A01G527400.1 | Wheat | cytosol | 14.01 | 56.69 |
| HORVU6Hr1G094220.1 | Barley | cytosol | 34.24 | 56.41 |
| TraesCS6B01G466100.1 | Wheat | cytosol | 59.92 | 51.08 |
| TraesCS6D01G400600.1 | Wheat | cytosol | 53.7 | 47.42 |
| TraesCS4A01G370900.1 | Wheat | cytosol | 35.6 | 45.19 |
| TraesCS7A01G072600.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 35.6 | 45.07 |
| TraesCS7A01G527300.1 | Wheat | plasma membrane | 24.9 | 44.14 |
| Os11t0278300-00 | Rice | cytosol | 35.99 | 41.29 |
| TraesCS4A01G026800.1 | Wheat | cytosol | 39.11 | 40.44 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 36.77 | 39.54 |
| TraesCS7A01G527500.1 | Wheat | cytosol | 34.05 | 39.5 |
| TraesCS2A01G419300.1 | Wheat | cytosol | 32.49 | 34.79 |
| TraesCS2A01G426400.1 | Wheat | cytosol | 32.1 | 33.2 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 31.13 | 32.19 |
| TraesCS1A01G017500.1 | Wheat | cytosol | 31.32 | 31.63 |
| TraesCS1A01G017600.1 | Wheat | cytosol | 30.74 | 28.99 |
| TraesCS3A01G497000.1 | Wheat | cytosol | 25.1 | 28.92 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G496100.1 | EnsemblPlantsGene:TraesCS7A01G496100 | InterPro:DUF247_pln | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 | PFAM:PF03140 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7A:-:686125606..686127150
Molecular Weight (calculated)
58254.7 Da
IEP (calculated)
8.325
GRAVY (calculated)
-0.200
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSAEAITAP VEDYSYLKET AQDCKASFSS EITDARDIPG CSREQVDKSV DFAEDVPTMV EKEYLMKAAQ ELKVDFDKRK EKMHRFPASL QGLGSQYMVP
101: RVVAIGPYHH GSPHLRQMEK VKHAAAYHFV SGSSHSLEEI YGAVVKVAHK ARRLYADDAV AGISHADFEA IMFYDACFLL EFMLIFNKKQ PPCPELLGVF
201: RSNKLHISND VMMLENQLPW LVVETLLNFR SVPLKKKISR MGEGLTNHMH PTEAEQVLSD LDEEYSPPHL LGLLRFYKTR CKTASNKPNI STNIVSINKL
301: DRSKARAAAE PDLSHLERHI PNKSRKRLGS TSISSSAIEL AEIGIKLKAI QTGSFTEIGL RKGPLFAELF LTPLVLSSVT ACWLVNMAAS EVCTTSGDQH
401: DDQEMAICSY IALLSMLMDR EEDVHELRVK HLVQGELTNK EMLRFFKSLT KHLSVGRSYC RILRHIESYK VNRWMWIKLH RFIYNNFKTM VMVFSVVGVL
501: AGIFKTLLSL KQHQ
101: RVVAIGPYHH GSPHLRQMEK VKHAAAYHFV SGSSHSLEEI YGAVVKVAHK ARRLYADDAV AGISHADFEA IMFYDACFLL EFMLIFNKKQ PPCPELLGVF
201: RSNKLHISND VMMLENQLPW LVVETLLNFR SVPLKKKISR MGEGLTNHMH PTEAEQVLSD LDEEYSPPHL LGLLRFYKTR CKTASNKPNI STNIVSINKL
301: DRSKARAAAE PDLSHLERHI PNKSRKRLGS TSISSSAIEL AEIGIKLKAI QTGSFTEIGL RKGPLFAELF LTPLVLSSVT ACWLVNMAAS EVCTTSGDQH
401: DDQEMAICSY IALLSMLMDR EEDVHELRVK HLVQGELTNK EMLRFFKSLT KHLSVGRSYC RILRHIESYK VNRWMWIKLH RFIYNNFKTM VMVFSVVGVL
501: AGIFKTLLSL KQHQ
001: MVRILSFTPP PPPPPPPSFR SIPRPPPPPS FRSIPPRRHF FKKKSKSLPP PPPPLPPARP FGPILPWRYS VKRKRTNRPQ PSTIQKDMFT WYFLTLMMRQ
101: KLQKQNQKPE ETREEWVISI RDKMEQALRE DATTSWDKLC IYRVPQYLQE NNKKSYFPQT VSLGPFHHGN KHLLPMDRHK WRAVNMVMAR TKHDIEMYID
201: AMKELEDRAR ACYEGPIDLS SNKFSEMLVL DGCFVLELFR GADEGFSELG YDRNDPVFAM RGSMHSIQRD MVMLENQLPL FVLNRLLEIQ LGKRHQTGLV
301: SRLAVRFFDP LMPTDEPLTK TDDSLEQDKF FNPIADKDKG ELHCLDVFRR NLLRPCSNPE PRLSRMRWSW RTRVADKRQQ QLIHCVTELR EAGIKFRTRK
401: TDRFWDIRFK NGYLEIPKLL IHDGTKSLFS NLIAFEQCHI DSSNDITSYI IFMDNLIDSS EDVRYLHYCG IIEHWLGNDY EVADLFNRLC QEVAFDPQNS
501: YLSQLSNKVD RNYSRKWNVL KAILKHKYFN NPWAYFSFFA ALVLLVLTLF QSFFTAYPYF NPPS
101: KLQKQNQKPE ETREEWVISI RDKMEQALRE DATTSWDKLC IYRVPQYLQE NNKKSYFPQT VSLGPFHHGN KHLLPMDRHK WRAVNMVMAR TKHDIEMYID
201: AMKELEDRAR ACYEGPIDLS SNKFSEMLVL DGCFVLELFR GADEGFSELG YDRNDPVFAM RGSMHSIQRD MVMLENQLPL FVLNRLLEIQ LGKRHQTGLV
301: SRLAVRFFDP LMPTDEPLTK TDDSLEQDKF FNPIADKDKG ELHCLDVFRR NLLRPCSNPE PRLSRMRWSW RTRVADKRQQ QLIHCVTELR EAGIKFRTRK
401: TDRFWDIRFK NGYLEIPKLL IHDGTKSLFS NLIAFEQCHI DSSNDITSYI IFMDNLIDSS EDVRYLHYCG IIEHWLGNDY EVADLFNRLC QEVAFDPQNS
501: YLSQLSNKVD RNYSRKWNVL KAILKHKYFN NPWAYFSFFA ALVLLVLTLF QSFFTAYPYF NPPS
Arabidopsis Description
Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:Q9SN05]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.