Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G438000.1 | Wheat | cytosol | 80.42 | 74.52 |
| TraesCS2D01G416300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 74.38 | 73.16 |
| HORVU2Hr1G098560.1 | Barley | cytosol, peroxisome | 56.46 | 71.32 |
| TraesCS2A01G426400.1 | Wheat | cytosol | 50.21 | 48.49 |
| TraesCS2A01G426300.1 | Wheat | cytosol | 46.46 | 44.87 |
| TraesCS1A01G383600.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 36.25 | 36.4 |
| TraesCS4A01G370900.1 | Wheat | cytosol | 29.79 | 35.31 |
| TraesCS7A01G072600.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 29.79 | 35.22 |
| Os11t0278300-00 | Rice | cytosol | 31.88 | 34.15 |
| TraesCS4A01G026800.1 | Wheat | cytosol | 34.79 | 33.6 |
| TraesCS7A01G496100.1 | Wheat | cytosol, nucleus, plasma membrane | 34.79 | 32.49 |
| TraesCS1A01G017500.1 | Wheat | cytosol | 33.33 | 31.43 |
| TraesCS7A01G527300.1 | Wheat | plasma membrane | 18.96 | 31.38 |
| TraesCS7A01G527500.1 | Wheat | cytosol | 27.71 | 30.02 |
| TraesCS1A01G017600.1 | Wheat | cytosol | 30.42 | 26.79 |
| TraesCS3A01G497000.1 | Wheat | cytosol | 23.33 | 25.11 |
| TraesCS7A01G527400.1 | Wheat | cytosol | 5.83 | 22.05 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G419300.1 | EnsemblPlantsGene:TraesCS2A01G419300 | InterPro:DUF247_pln | ncoils:Coil | PANTHER:PTHR31549 | PANTHER:PTHR31549:SF32 |
| PFAM:PF03140 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:674532623..674534065
Molecular Weight (calculated)
52432.3 Da
IEP (calculated)
4.599
GRAVY (calculated)
-0.119
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQVPWEYQL AVADYWNGGP AAMEPAATAW VPGLPLEMTV AAPAASHGDL AVSSSGRQHQ HQLVMVESTT DNHHGRYEWS GPVEAFEEAA RAFEDKLGMA
101: ETKIHLFPVS MVDLAERYAA PRTVSIGPYH HGLSPAVLQM ESTKHVASWH FVRASGRSVE EVYAAVCAVA DEARGCYDEG RVRGLADDDF KPMMFFDGCF
201: LLQYLLFACT DGDDDDDEEG MAVDPALRSA FSSDSDRIFS DVVLLENQLP WVVVETLMSF VPAPGLDLPK LVGRVKGSLQ ARQALGEKPP AWDSSYTPPH
301: LLGLLRHYIV GTGTKLSSDS SSRGLSEKAE KVSISVSAVE LAEMGIQLTA TKTGAELKEM GVKKGLLSGE LFLAPLSLDD ANAGFLVNMA ALELCTTPDF
401: YEADEERSTV CSYLCLLGMV TDRVEDVQEL RTNHILQGGA GLTNEDALRL FISLEKHLRP GRCYVRTMLA IENYRVQGRP
101: ETKIHLFPVS MVDLAERYAA PRTVSIGPYH HGLSPAVLQM ESTKHVASWH FVRASGRSVE EVYAAVCAVA DEARGCYDEG RVRGLADDDF KPMMFFDGCF
201: LLQYLLFACT DGDDDDDEEG MAVDPALRSA FSSDSDRIFS DVVLLENQLP WVVVETLMSF VPAPGLDLPK LVGRVKGSLQ ARQALGEKPP AWDSSYTPPH
301: LLGLLRHYIV GTGTKLSSDS SSRGLSEKAE KVSISVSAVE LAEMGIQLTA TKTGAELKEM GVKKGLLSGE LFLAPLSLDD ANAGFLVNMA ALELCTTPDF
401: YEADEERSTV CSYLCLLGMV TDRVEDVQEL RTNHILQGGA GLTNEDALRL FISLEKHLRP GRCYVRTMLA IENYRVQGRP
001: MDPQIVVDIK SLISEDNGLK LLRESAGSEL CCIVRIPQSL ARINLKAYEP KIVSIGPYHH GKEHLKMTQQ HKRRFLKFFV AKMEEKGFVP QELVKAVSSL
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
101: EGVIRGSYSE DLGLDSENLV QMMVLDGCFI LTLFFVVSGK VEYTNLDDPI FRMPWILPSI RADLLLLENQ VPYVLLQTLF ETSKLVTCSG LNEIAFEFFN
201: YSLQKPETFW EKHYGLEAKH LLDLIRKTFV PVPSQRRIKD HSSKSSFNDH EYLGFVLSAK KLHLRGIKFK PRKNTDSILD ISYSNGVLHI PPVVMDDFTA
301: SIFLNCVAFE QLYADSSNHI TSYVAFMACL INEESDASFL SERRILENYF GTEDEVSRFY KRIGKDIALD LEKSYLAKVF EGVNEYTSQG FHVHCAEFIH
401: THFDSPWTFA SSFAALLLLL FAALQVFFAA YSYFRPPKEK
Arabidopsis Description
At5g22540 [Source:UniProtKB/TrEMBL;Acc:Q9FK85]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.